RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	GLYR1	Q49A26	553 aa	Predicted RBP	3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	EIPR1	Q53HC9	387 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ADAM5	Q6NVV9	412 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	C19orf35	Q6ZS72	473 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	LUZP2	Q86TE4	346 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	HPS6	Q86YV9	775 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	HIPK1	Q86Z02	1210 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ERI1	Q8IV48	349 aa	Known RBP	3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	FAM184A	Q8NB25	1140 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	OR4C5	Q8NGB2	326 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	PAQR8	Q8TEZ7	354 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ELMO1	Q92556	727 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	SLC38A4	Q969I6	547 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	CHIA	Q9BZP6	476 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ILKAP	Q9H0C8	392 aa	Predicted RBP	3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	NIPAL2	Q9H841	368 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ANKRA2	Q9H9E1	313 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	RPRD1B	Q9NQG5	326 aa	Known RBP	3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	GCNT4	Q9P109	453 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	PLLP	Q9Y342	182 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	STARD10	Q9Y365	291 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	PCNX3	Q9H6A9	2034 aa		3.92	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	PLEKHH1	Q9ULM0	1364 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	SMIM28	A0A1B0GU29	152 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006		A0A1W2PPV9	198 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	DHRS7C	A6NNS2	312 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006		K7ENP7	123 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	HIP1	O00291	1037 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	LAT	O43561	262 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	LALBA	P00709	142 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	MMP1	P03956	469 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006		P04436	131 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	SERPIND1	P05546	499 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	HOXD4	P09016	255 aa	Predicted RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ZNF853	P0CG23	659 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	STAG3L3	P0CL85	134 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	KITLG	P21583	273 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	HTR1F	P30939	366 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	GCK	P35557	465 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	CCT6A	P40227	531 aa	Known RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	OPRD1	P41143	372 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	RPS14	P62263	151 aa	Known RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	CHRNB3	Q05901	458 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	MERTK	Q12866	999 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	GRB7	Q14451	532 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	OXA1L	Q15070	435 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ZNF77	Q15935	545 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	GLIPR1L2	Q4G1C9	344 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	SLC22A6	Q4U2R8	563 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	METTL11B	Q5VVY1	283 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	OR5M10	Q6IEU7	315 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	ANGPTL8	Q6UXH0	198 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	HSDL2	Q6YN16	418 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	LRRC74B	Q6ZQY2	392 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	GPRIN3	Q6ZVF9	776 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	PGAP1	Q75T13	922 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	EIF3M	Q7L2H7	374 aa	Known RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	TMCO2	Q7Z6W1	182 aa	Predicted RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	NUDCD3	Q8IVD9	361 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	NRM	Q8IXM6	262 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	OFCC1	Q8IZS5	231 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	OR56B4	Q8NH76	319 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	CCDC26	Q8TAB7	109 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	TSEN15	Q8WW01	171 aa	Known RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	UFD1	Q92890	307 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	PEX13	Q92968	403 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	SEC22A	Q96IW7	307 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	OR5M11	Q96RB7	305 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	TBX15	Q96SF7	602 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	BPIFA3	Q9BQP9	254 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	SUDS3	Q9H7L9	328 aa	Predicted RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	GNB4	Q9HAV0	340 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	MIEF1	Q9NQG6	463 aa		3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006	RPL36	Q9Y3U8	105 aa	Known RBP	3.91	□□□□□ -1.78
CALCOCO2-222	ENST00000514006		A0A0J9YWU9	116 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PSTPIP1	O43586	416 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	UGT1A9	O60656	530 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SLITRK3	O94933	977 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SLC35E2	P0CK97	266 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR8G3P	P0DMU2	310 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PGAM2	P15259	253 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CALCR	P30988	508 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	IL2RG	P31785	369 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PLK1	P53350	603 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ACLY	P53396	1101 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KRTAP10-11	P60412	298 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	KCNJ2	P63252	427 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	PAX2	Q02962	417 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SCRN3	Q0VDG4	424 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	RUNX3	Q13761	415 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	TGIF1	Q15583	401 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ISX	Q2M1V0	245 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ALKBH6	Q3KRA9	238 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	SBK1	Q52WX2	424 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	CAVIN4	Q5BKX8	364 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OR52E8	Q6IFG1	317 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	ZNF343	Q6P1L6	599 aa		3.9	□□□□□ -1.79
CALCOCO2-222	ENST00000514006	OTUD6A	Q7L8S5	288 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms