RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 MARCH8Q5T0T0 291 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 GPRC6AQ5T6X5 926 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 ACSM5Q6NUN0 579 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 APTXQ7Z2E3 356 aaKnown RBP0.94□□□□□ -2.26
PDGFC-208ENST00000512711 ANKRD37Q7Z713 158 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 PAQR7Q86WK9 346 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 IQCA1Q86XH1 822 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 PGAM4Q8N0Y7 254 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 KIR3DL3Q8N743 410 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 LINC00304Q8N9R0 145 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 OR51G2Q8NGK0 314 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 OR9G1Q8NH87 305 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 DTX3LQ8TDB6 740 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 DQX1Q8TE96 717 aaKnown RBP0.94□□□□□ -2.26
PDGFC-208ENST00000512711 RPL3LQ92901 407 aaKnown RBP0.94□□□□□ -2.26
PDGFC-208ENST00000512711 EEF2KMTQ96G04 330 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 CABS1Q96KC9 395 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 TBCDQ9BTW9 1192 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 OSBPL11Q9BXB4 747 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 NAT10Q9H0A0 1025 aaKnown RBP0.94□□□□□ -2.26
PDGFC-208ENST00000512711 TMEM231Q9H6L2 316 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 ZFP14Q9HCL3 533 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 YAE1D1Q9NRH1 226 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 TRAF3IP3Q9Y228 551 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 ATP10DQ9P241 1426 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 NLRC5Q86WI3 1866 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 TRAV40A0A0B4J280 105 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 IGHV2-70DA0A0C4DH43 119 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 A0A1W2PRQ8 180 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 CFAP73A6NFT4 308 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 C17orf51A8MQB3 221 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 SDHDO14521 159 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 PRKYO43930 277 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 JAK2O60674 1132 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 CA1P00915 261 aaPredicted RBP0.93□□□□□ -2.26
PDGFC-208ENST00000512711 CISD3P0C7P0 127 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 PNMTP11086 282 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 RALAP11233 206 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 GDI1P31150 447 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 COPB2P35606 906 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 PRKXP51817 358 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 KPNA2P52292 529 aaKnown RBP0.93□□□□□ -2.26
PDGFC-208ENST00000512711 DLX1P56177 255 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 SLC26A5P58743 744 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ARL6IP1Q15041 203 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 MAPK6Q16659 721 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 LINC01620Q4KN68 170 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 BOLA3Q53S33 107 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 C11orf71Q6IPW1 123 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 NANOGP8Q6NSW7 305 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ZNF880Q6PDB4 577 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ZNF620Q6ZNG0 422 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 SHISA6Q6ZSJ9 500 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 NEGR1Q7Z3B1 354 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 CCDC91Q7Z6B0 441 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 RDH10Q8IZV5 341 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 OSR2Q8N2R0 312 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 OR10G3Q8NGC4 313 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 NANPQ8TBE9 248 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ST8SIA1Q92185 356 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 RAPGEF5Q92565 580 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ESR2Q92731 530 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ATP6V1E2Q96A05 226 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 LRRC58Q96CX6 371 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 CCNL2Q96S94 520 aaPredicted RBP0.93□□□□□ -2.26
PDGFC-208ENST00000512711 HIST1H4GQ99525 98 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 NDFIP1Q9BT67 221 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 NAT9Q9BTE0 207 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 SELENOIQ9C0D9 397 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 DNTTIP1Q9H147 329 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 NOX3Q9HBY0 568 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 SYTL2Q9HCH5 934 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 AGPAT5Q9NUQ2 364 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 CLCF1Q9UBD9 225 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ZNF222Q9UK12 451 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 FOXJ3Q9UPW0 622 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 RNF6Q9Y252 685 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 SDK2Q58EX2 2172 aa0.93□□□□□ -2.26
PDGFC-208ENST00000512711 ZNF407Q9C0G0 2248 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 DCTN6O00399 190 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 B4GALT5O43286 388 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 TRIM16O95361 564 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 OPN1LWP04000 364 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 CENPBP07199 599 aaPredicted RBP0.92□□□□□ -2.26
PDGFC-208ENST00000512711 CA3P07451 260 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 POLR2EP19388 210 aaKnown RBP0.92□□□□□ -2.26
PDGFC-208ENST00000512711 FMO3P31513 532 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 YBEYP58557 167 aaPredicted RBP0.92□□□□□ -2.26
PDGFC-208ENST00000512711 KLHL30Q0D2K2 578 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 SPP2Q13103 211 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 PPP2R5CQ13362 524 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 PRSS8Q16651 343 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 C16orf62Q7Z3J2 963 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 ZNF571Q7Z3V5 609 aaPredicted RBP0.92□□□□□ -2.26
PDGFC-208ENST00000512711 ERASQ7Z444 233 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 KRT77Q7Z794 578 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 CAMK2N1Q7Z7J9 78 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 CALHM3Q86XJ0 350 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 CBWD2Q8IUF1 395 aa0.92□□□□□ -2.26
PDGFC-208ENST00000512711 RNF148Q8N7C7 305 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms