RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 DNAJA3Q96EY1 480 aa14.34□□□□□ -0.11
PDLIM5-216ENST00000511767 KAT8Q9H7Z6 458 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-216ENST00000511767 KLHL28Q9NXS3 571 aa14.34□□□□□ -0.11
PDLIM5-216ENST00000511767 KLHL14Q9P2G3 628 aa14.34□□□□□ -0.11
PDLIM5-216ENST00000511767 KLHL9Q9P2J3 617 aa14.34□□□□□ -0.11
PDLIM5-216ENST00000511767 TESMINQ9Y4I5 508 aa14.34□□□□□ -0.11
PDLIM5-216ENST00000511767 OTOGQ6ZRI0 2925 aa14.34□□□□□ -0.11
PDLIM5-216ENST00000511767 ROS1P08922 2347 aa14.33□□□□□ -0.11
PDLIM5-216ENST00000511767 IGKV3D-15A0A087WSY6 115 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 LOC100653049A0A140TA62 436 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 ENO4A6NNW6 628 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 ZNF716A6NP11 495 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 M0QX08 132 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 FRS3O43559 492 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 DNPH1O43598 174 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 KRT34O76011 436 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 MFN2O95140 757 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 HRGP04196 525 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 FESP07332 822 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 FPR1P21462 350 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 ADSLP30566 484 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 DNAJA1P31689 397 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 CCKARP32238 428 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 OR2B6P58173 313 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 HOXC5Q00444 222 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 NFYCQ13952 458 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 GLIPR1L2Q4G1C9 344 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 NANOGP8Q6NSW7 305 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 DHRS4L2Q6PKH6 230 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 TFAP2EQ6VUC0 442 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 CDH24Q86UP0 819 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 STK32CQ86UX6 486 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 CCDC103Q8IW40 242 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 CADM2Q8N3J6 435 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 DDIT4LQ96D03 193 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 ZNF300Q96RE9 604 aaPredicted RBP14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 TACO1Q9BSH4 297 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 PRR14Q9BWN1 585 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 HDHD5Q9BXW7 423 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 PLEKHF2Q9H8W4 249 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 NANOGQ9H9S0 305 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 CACYBPQ9HB71 228 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 MRGBPQ9NV56 204 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 GPR52Q9Y2T5 361 aa14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 ANKRD17O75179 2603 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-216ENST00000511767 A0A1W2PPR1 153 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 SIAH2O43255 324 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 RAMP1O60894 148 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 NPIPB7O75200 414 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 SERPINB7O75635 380 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 GOSR1O95249 250 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 THBDP07204 575 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 CRYGSP22914 178 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 EDNRAP25101 427 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 OR3A2P47893 321 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 PCBP3P57721 371 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 MTPNP58546 118 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 SLC35A1P78382 337 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 DMTNQ08495 405 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 RBBP4Q09028 425 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 BNIP2Q12982 314 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 CYLC2Q14093 348 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 CAPRIN1Q14444 709 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 NET1Q7Z628 596 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 KRT73Q86Y46 540 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 LSMEM1Q8N8F7 131 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 C11orf65Q8NCR3 313 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 HIPK4Q8NE63 616 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 C3orf49Q96BT1 292 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 LRRC58Q96CX6 371 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 WFDC6Q9BQY6 131 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 SPATA5L1Q9BVQ7 753 aa14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 HRNRQ86YZ3 2850 aaPredicted RBP14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 PRRC2AP48634 2157 aaKnown RBP14.32□□□□□ -0.12
PDLIM5-216ENST00000511767 A8MVM7 634 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 DEFB108AA8MXU0 73 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 KLF4O43474 513 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 TPST2O60704 377 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 EIF1BO60739 113 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 NPPAP01160 153 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 PSMB1P20618 241 aaKnown RBP14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 SLC16A1P53985 500 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 CEACAM7Q14002 265 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 TESK1Q15569 626 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 DUSP7Q16829 419 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 COQ5Q5HYK3 327 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 SFRP5Q5T4F7 317 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 GALNT5Q7Z7M9 940 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 ATG4DQ86TL0 474 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 OR10A6Q8NH74 314 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 C10orf82Q8WW14 230 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 ZNF607Q96SK3 696 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 MED18Q9BUE0 208 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 OR10A4Q9H209 315 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 FANCFQ9NPI8 374 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 ZNF226Q9NYT6 803 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 C6orf203Q9P0P8 240 aaPredicted RBP14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 ITGB1BP2Q9UKP3 347 aa14.31□□□□□ -0.12
PDLIM5-216ENST00000511767 LIPT2A6NK58 231 aa14.3□□□□□ -0.12
PDLIM5-216ENST00000511767 FXYD1O00168 92 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms