RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 RPS14P62263 151 aaKnown RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 SKP1P63208 163 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 RAB40BQ12829 278 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 OR2F1Q13607 317 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 NDUFA9Q16795 377 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ISXQ2M1V0 245 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ODF4Q2M2E3 257 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 NKAIN2Q5VXU1 208 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 C9orf57Q5W0N0 161 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF770Q6IQ21 691 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 C11orf88Q6PI97 169 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ESPNLQ6ZVH7 1005 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 THNSL2Q86YJ6 484 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 B3GALNT2Q8NCR0 500 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 OR4L1Q8NH43 312 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 DUSP19Q8WTR2 217 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 RFKQ969G6 155 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 IMP4Q96G21 291 aaKnown RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 APIPQ96GX9 242 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF582Q96NG8 517 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 PANX1Q96RD7 426 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 MRIQ9BWK5 157 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ACPTQ9BZG2 426 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 RNF39Q9H2S5 420 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TMEM27Q9HBJ8 222 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 BPIFA1Q9NP55 256 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 FGF20Q9NP95 211 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 THSD1Q9NS62 852 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TVP23BQ9NYZ1 205 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 IL17BQ9UHF5 180 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 SH3BGRL2Q9UJC5 107 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 EXOSC1Q9Y3B2 195 aaKnown RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 MAP4K5Q9Y4K4 846 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TIMM10BQ9Y5J6 103 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3DA0A087WVF3 549 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3IA0A087WXS9 549 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3EA0A087X179 549 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3KA0A087X1G2 549 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3FA6NER0 549 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 GGT3PA6NGU5 568 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 OR2AT4A6NND4 320 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 IDSB3KWA1 339 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3LB9A6J9 549 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CTDSPLO15194 276 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ADAP00813 363 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 SLC35G4P0C7Q5 338 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ACP2P11117 423 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 GALP22466 123 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CCND3P30281 292 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 OR1E1P30953 314 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 SCNN1AP37088 669 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 GSK3AP49840 483 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CPSF6Q16630 551 aaKnown RBP eCLIP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 KHDC3LQ587J8 217 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 COX20Q5RI15 118 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3CQ6IPX1 549 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CDC73Q6P1J9 531 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CAMKMTQ7Z624 323 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 SCD5Q86SK9 330 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 NRROSQ86YC3 692 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TBC1D3Q8IZP1 549 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF664Q8N3J9 261 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 NKAIN3Q8N8D7 197 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 ZNF321PQ8N8H1 164 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 FBXO15Q8NCQ5 510 aaPredicted RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 OR10A7Q8NGE5 316 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CD200R1Q8TD46 325 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 MRPS31Q92665 395 aaKnown RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CMTM7Q96FZ5 175 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CDKN2AIPNLQ96HQ2 116 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 WFDC6Q9BQY6 131 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 MED10Q9BTT4 135 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TMEM106CQ9BVX2 250 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 RHOFQ9HBH0 211 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 PARD6AQ9NPB6 346 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TLR8Q9NR97 1041 aaKnown RBP6.78□□□□□ -1.32
CPNE4-208ENST00000511604 TMEM100Q9NV29 134 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 PTGFRNQ9P2B2 879 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 OR14J1Q9UGF5 321 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CACFD1Q9UGQ2 172 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 CAMK2AQ9UQM7 478 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 SLC27A6Q9Y2P4 619 aa6.78□□□□□ -1.32
CPNE4-208ENST00000511604 A0A0G2JMZ2 1700 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 LRRC37A2A6NM11 1700 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 LRRC37AA6NMS7 1700 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 TMEM272A0A1B0GTI8 110 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 MYBPHLA2RUH7 354 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 OR5H15A6NDH6 313 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 OR5H1A6NKK0 313 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 MAGEB17A8MXT2 336 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 RPL36A-HNRNPH2H7BZ11 118 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 M0R143 59 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 GABRDO14764 452 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 PGRMC2O15173 223 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
CPNE4-208ENST00000511604 NDUFB6O95139 128 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 NXPH2O95156 264 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 PCDH8O95206 1070 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 SERPINA5P05154 406 aa6.77□□□□□ -1.33
CPNE4-208ENST00000511604 ASGR1P07306 291 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms