RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 OPRM1P35372 400 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PTGER4P35408 488 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 MAGEA8P43361 318 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CPA2P48052 419 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 P2RY4P51582 365 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CRISP3P54108 245 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CASP6P55212 293 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SIRPAP78324 504 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 IRX1P78414 480 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 TXNL4AP83876 142 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CDK6Q00534 326 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 EGR4Q05215 589 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SELENBP1Q13228 472 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SCARB2Q14108 478 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 FBXL19-AS1Q494R0 122 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 LIN52Q52LA3 116 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 COQ5Q5HYK3 327 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ATAD3BQ5T9A4 648 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ZBTB37Q5TC79 503 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 NANOGP8Q6NSW7 305 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 AAGABQ6PD74 315 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 DHRS4L2Q6PKH6 230 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ZNF474Q6S9Z5 364 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SEZ6L2Q6UXD5 910 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 WDR88Q6ZMY6 472 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 EIF3MQ7L2H7 374 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PIGWQ7Z7B1 504 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 MTDHQ86UE4 582 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ADGRG3Q86Y34 549 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 GRAMD2AQ8IUY3 354 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 DMRTC2Q8IXT2 367 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PM20D2Q8IYS1 436 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 RBM15BQ8NDT2 890 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 BBS10Q8TAM1 723 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 TSPEARQ8WU66 669 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ABHD3Q8WU67 409 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 OIT3Q8WWZ8 545 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 RND1Q92730 232 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 INTS12Q96CB8 462 aaKnown RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 MRGPRX4Q96LA9 322 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ZNF583Q96ND8 569 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 ARHGDIGQ99819 225 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PIGQQ9BRB3 760 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PTDSS2Q9BVG9 487 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 OPN3Q9H1Y3 402 aaPredicted RBP6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 NANOGQ9H9S0 305 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CALHM2Q9HA72 323 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SDHAF3Q9NRP4 125 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SEC14L4Q9UDX3 406 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 PACSIN3Q9UKS6 424 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 LIPT1Q9Y234 373 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 SLC35A3Q9Y2D2 325 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 AP4B1Q9Y6B7 739 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 CAPN7Q9Y6W3 813 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 MPDZO75970 2070 aa6.43□□□□□ -1.38
TOPBP1-207ENST00000509162 LOC100653049A0A140TA62 436 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 SLC22A20A6NK97 555 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ZNF716A6NP11 495 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 FTCDNL1E5RQL4 147 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 FAAHO00519 579 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ANGPT2O15123 496 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 NPIPB7O75200 414 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 KRT34O76011 436 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 UBOX5O94941 541 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 MFN2O95140 757 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 RCBTB2O95199 551 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 DBIP07108 87 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 FESP07332 822 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 COX4I1P13073 169 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 HPGDP15428 266 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 BMP5P22003 454 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 TACR3P29371 465 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 AGTR1P30556 359 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 IDH2P48735 452 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 CLK3P49761 638 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ZNF41P51814 821 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 HPCAP84074 193 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 BNIP2Q12982 314 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 CBFBQ13951 182 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 NRF1Q16656 503 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 SYT14P1Q58G82 188 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 PRAMEF8Q5VWM4 474 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 PRAMEF7Q5VXH5 474 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 FAM91A1Q658Y4 838 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 MTFR2Q6P444 385 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 XKRXQ6PP77 449 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ENPP6Q6UWR7 440 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 NUFIP2Q7Z417 695 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 TSEN54Q7Z6J9 526 aaKnown RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ATG4DQ86TL0 474 aaPredicted RBP6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 CMIPQ8IY22 773 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 SLC15A3Q8IY34 581 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 LILRA2Q8N149 483 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 SMYD1Q8NB12 490 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 OR10A6Q8NH74 314 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ROBO4Q8WZ75 1007 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 ST8SIA1Q92185 356 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 LRRC58Q96CX6 371 aa6.42□□□□□ -1.38
TOPBP1-207ENST00000509162 STARD4Q96DR4 205 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms