RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 GHDCQ8N2G8 530 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 UBE2J2Q8N2K1 259 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 TMEM105Q8N8V8 129 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 NLGN4YQ8NFZ3 816 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 OR52R1Q8NGF1 315 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 OR5W2Q8NH69 310 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 TMEM255BQ8WV15 326 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZDHHC12Q96GR4 267 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 LRFN5Q96NI6 719 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF285Q96NJ3 590 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 C7orf50Q9BRJ6 194 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 THAP7Q9BT49 309 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 OR52D1Q9H346 318 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 B3GAT2Q9NPZ5 323 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SIDT1Q9NXL6 827 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 HAO2Q9NYQ3 351 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC7A7Q9UM01 511 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ING4Q9UNL4 249 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PLCL2Q9UPR0 1127 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SATB2Q9UPW6 733 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF318Q5VUA4 2279 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PEX12O00623 359 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 NUDT21O43809 227 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 TMEM127O75204 238 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 OR2B3O76000 313 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 NSA2O95478 260 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC35E2P0CK97 266 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PRKCAP17252 672 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CSF2RBP32927 897 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 EEF1A1P68104 462 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 STX4Q12846 297 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 FAM53BQ14153 422 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 EXOSC6Q5RKV6 272 aaKnown RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PRAMEF17Q5VTA0 474 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 VASNQ6EMK4 673 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF619Q8N2I2 560 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 SDR16C5Q8N3Y7 309 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 COX18Q8N8Q8 333 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CDRT4Q8N9R6 151 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 OR51G2Q8NGK0 314 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ANGPTL6Q8NI99 470 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 DEDD2Q8WXF8 326 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 MFRPQ9BY79 579 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF350Q9GZX5 532 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 FSCN3Q9NQT6 498 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 POLE3Q9NRF9 147 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CMC2Q9NRP2 79 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 DUSP22Q9NRW4 184 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 PLSCR3Q9NRY6 295 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF275Q9NSD4 429 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 KCNE5Q9UJ90 142 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF223Q9UK11 482 aaPredicted RBP10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 DTX4Q9Y2E6 619 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CLDN16Q9Y5I7 305 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CSNK1G3Q9Y6M4 447 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 CLCA3PQ9Y6N3 262 aa10.14□□□□□ -0.79
SH3RF1-203ENST00000508685 RP1P56715 2156 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 UNC13CQ8NB66 2214 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 C2orf92A0A1B0GVN3 265 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 GXYLT2A0PJZ3 443 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 SMIM30A4D0T7 59 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 ANKRD61A6NGH8 418 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 PRR23D1E9PI22 279 aaPredicted RBP10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 BHLHE40O14503 412 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 SOCS6O14544 535 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 STX11O75558 287 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 THY1P04216 161 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 PRR23D2P0DMB1 279 aaPredicted RBP10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 PTNP21246 168 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 S1PR1P21453 382 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 RPS4Y1P22090 263 aaKnown RBP10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 AHCYP23526 432 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 MAP3K8P41279 467 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 DHPSP49366 369 aaPredicted RBP10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF136P52737 540 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 NUBP1P53384 320 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 EPHA4P54764 986 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 CTBP2P56545 445 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 GALK2Q01415 458 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 SHBQ15464 509 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 PLBD1Q6P4A8 553 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF782Q6ZMW2 699 aaPredicted RBP10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 ZAR1Q86SH2 424 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 SIRT6Q8N6T7 355 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 LRRC17Q8N6Y2 441 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 FANK1Q8TC84 345 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 TMEM239Q8WW34 195 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 UPRTQ96BW1 309 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 ARSGQ96EG1 525 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 CMTM3Q96MX0 182 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 STACQ99469 402 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 WACQ9BTA9 647 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 RANBP3Q9H6Z4 567 aaPredicted RBP10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 ENAMQ9NRM1 1142 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 MALT1Q9UDY8 824 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 EPHA6Q9UF33 1036 aa10.13□□□□□ -0.79
SH3RF1-203ENST00000508685 SHISA3A0PJX4 238 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 RIIAD1A6NNX1 92 aa10.12□□□□□ -0.79
SH3RF1-203ENST00000508685 NOTOA8MTQ0 251 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms