RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 OR10H5Q8NGA6 315 aa9.99□□□□□ -0.81
SIL1-208ENST00000505945 OR52E4Q8NGH9 312 aa9.99□□□□□ -0.81
SIL1-208ENST00000505945 PIGXQ8TBF5 258 aa9.99□□□□□ -0.81
SIL1-208ENST00000505945 CNOT9Q92600 299 aaKnown RBP9.99□□□□□ -0.81
SIL1-208ENST00000505945 ROPN1BQ9BZX4 212 aaPredicted RBP9.99□□□□□ -0.81
SIL1-208ENST00000505945 C20orf27Q9GZN8 174 aa9.99□□□□□ -0.81
SIL1-208ENST00000505945 ROPN1Q9HAT0 212 aaPredicted RBP9.99□□□□□ -0.81
SIL1-208ENST00000505945 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.99□□□□□ -0.81
SIL1-208ENST00000505945 TMEM181Q9P2C4 612 aa9.99□□□□□ -0.81
SIL1-208ENST00000505945 MALT1Q9UDY8 824 aa9.99□□□□□ -0.81
SIL1-208ENST00000505945 MARCOQ9UEW3 520 aaPredicted RBP9.99□□□□□ -0.81
SIL1-208ENST00000505945 CUBNO60494 3623 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 YLPM1P49750 1951 aaKnown RBP9.98□□□□□ -0.81
SIL1-208ENST00000505945 TMED7-TICAM2A0A0A6YYA0 188 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 DNPH1O43598 174 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 IMPDH2P12268 514 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 FKBP2P26885 142 aaKnown RBP9.98□□□□□ -0.81
SIL1-208ENST00000505945 CHI3L1P36222 383 aaPredicted RBP9.98□□□□□ -0.81
SIL1-208ENST00000505945 MAGEA8P43361 318 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 ABCE1P61221 599 aaKnown RBP9.98□□□□□ -0.81
SIL1-208ENST00000505945 VSNL1P62760 191 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 CASP8Q14790 479 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 CHI3L2Q15782 390 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 TMEM249Q2WGJ8 235 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 SPANXN4Q5MJ08 99 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 OR7E24Q6IFN5 339 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 CASP12Q6UXS9 341 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 PHC2Q8IXK0 858 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 DEPDC4Q8N2C3 294 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 ZNF525Q8N782 197 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 ANKFN1Q8N957 763 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 WDR31Q8NA23 367 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 OIT3Q8WWZ8 545 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 TESCQ96BS2 214 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 NEURL3Q96EH8 262 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 ZIM3Q96PE6 472 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 TNFRSF13CQ96RJ3 184 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 SLC35A5Q9BS91 424 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 INPP5KQ9BT40 448 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 EXOSC3Q9NQT5 275 aaKnown RBP9.98□□□□□ -0.81
SIL1-208ENST00000505945 SLC7A10Q9NS82 523 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 OSGIN1Q9UJX0 560 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 TRAPPC4Q9Y296 219 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 TMED7Q9Y3B3 224 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 ATP23Q9Y6H3 246 aa9.98□□□□□ -0.81
SIL1-208ENST00000505945 TMEM72A0PK05 275 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 ZC3H12DA2A288 527 aaKnown RBP9.97□□□□□ -0.81
SIL1-208ENST00000505945 ELOA3DA6NLF2 546 aaPredicted RBP9.97□□□□□ -0.81
SIL1-208ENST00000505945 PDLIM1O00151 329 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 HMGN4O00479 90 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 LY6HO94772 140 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 SERPINE1P05121 402 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 MYZAPP0CAP1 466 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 TACR3P29371 465 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 S100A3P33764 101 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 HTR3AP46098 478 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 KHKP50053 298 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 RPL14P50914 215 aaKnown RBP9.97□□□□□ -0.81
SIL1-208ENST00000505945 NME5P56597 212 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 DSCR9P59020 149 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 SLC35A1P78382 337 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 HPCAP84074 193 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 LOXL1Q08397 574 aaPredicted RBP9.97□□□□□ -0.81
SIL1-208ENST00000505945 SYPL1Q16563 259 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 ELOA3BQ3SY89 546 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 FAM174BQ3ZCQ3 159 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 C6orf52Q5T4I8 152 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 TSPO2Q5TGU0 170 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 RNF130Q86XS8 419 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 ELOA3Q8NG57 546 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 NANOS1Q8WY41 292 aaKnown RBP9.97□□□□□ -0.81
SIL1-208ENST00000505945 TEX37Q96LM6 180 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 NAA11Q9BSU3 229 aaPredicted RBP9.97□□□□□ -0.81
SIL1-208ENST00000505945 SLC38A1Q9H2H9 487 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 MANSC1Q9H8J5 431 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 PARPBPQ9NWS1 579 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 UPB1Q9UBR1 384 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 RAP2CQ9Y3L5 183 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 FLVCR1Q9Y5Y0 555 aa9.97□□□□□ -0.81
SIL1-208ENST00000505945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.96□□□□□ -0.817e-10■■■■■ 75.6
SIL1-208ENST00000505945 CCDC154A6NI56 674 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 AGAP5A6NIR3 686 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 E9PBE3 544 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 H7C417 338 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 EIF1BO60739 113 aaKnown RBP9.96□□□□□ -0.82
SIL1-208ENST00000505945 CHRM4P08173 479 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 LBPP18428 481 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 CDH2P19022 906 aaPredicted RBP9.96□□□□□ -0.82
SIL1-208ENST00000505945 SLC1A6P48664 564 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 POLR2HP52434 150 aaKnown RBP9.96□□□□□ -0.82
SIL1-208ENST00000505945 VLDLRP98155 873 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 SLC25A3Q00325 362 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 SLC17A1Q14916 467 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 ZNF544Q6NX49 715 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 FAM168AQ92567 244 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 PMM1Q92871 262 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 DDIT4LQ96D03 193 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 TRNT1Q96Q11 434 aaKnown RBP9.96□□□□□ -0.82
SIL1-208ENST00000505945 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
SIL1-208ENST00000505945 SORT1Q99523 831 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms