RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 OR4E2Q8NGC2 313 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 OR52E2Q8NGJ4 325 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 OR4K13Q8NH42 304 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 ZNF671Q8TAW3 534 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 ZCCHC10Q8TBK6 192 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 RBPMSQ93062 196 aaKnown RBP10.95□□□□□ -0.66
UBE3D-206ENST00000505226 LINC00052Q96N35 136 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 NOX4Q9NPH5 578 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 NANSQ9NR45 359 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 C2orf42Q9NWW7 574 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 POMT2Q9UKY4 750 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 KCNMB2Q9Y691 235 aa10.95□□□□□ -0.66
UBE3D-206ENST00000505226 RANBP2P49792 3224 aaKnown RBP10.95□□□□□ -0.66
UBE3D-206ENST00000505226 GXYLT2A0PJZ3 443 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ZNF860A6NHJ4 632 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PSMD9O00233 223 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ARPC1BO15143 372 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 FGF19O95750 216 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ACSM4P0C7M7 580 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 LAMP2P13473 410 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 HIST1H1CP16403 213 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PSMB1P20618 241 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 TNFRSF17Q02223 184 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 OPCMLQ14982 345 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 SFRP5Q5T4F7 317 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 MTSS1LQ765P7 747 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 UXS1Q8NBZ7 420 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 TMEM52Q8NDY8 209 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 CNOT9Q92600 299 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 SFXN2Q96NB2 322 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 C12orf10Q9HB07 376 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 MED31Q9Y3C7 131 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PCDHGA5Q9Y5G8 931 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PLSCR5A0PG75 271 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ACOD1A6NK06 481 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PRR32B1ATL7 298 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 LDB3O75112 727 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 GATBO75879 557 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 TGM6O95932 706 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ZNF3P17036 446 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 EXOSC7Q15024 291 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 EIPR1Q53HC9 387 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 UBE2NLQ5JXB2 153 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 EXOSC6Q5RKV6 272 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 FBXO42Q6P3S6 717 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ZC3H14Q6PJT7 736 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 APOOLQ6UXV4 268 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PRSS42Q7Z5A4 293 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 CDH24Q86UP0 819 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 OR4K14Q8NGD5 310 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ZPLD1Q8TCW7 415 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 RADILQ96JH8 1075 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ZNF559Q9BR84 538 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 C7orf50Q9BRJ6 194 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ACTR6Q9GZN1 396 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 LYARQ9NX58 379 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 RDH8Q9NYR8 311 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ICAM5Q9UMF0 924 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 MAB21L2Q9Y586 359 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 FKBP7Q9Y680 259 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 EML5Q05BV3 1969 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 TRBV2A0A0J9YWF9 115 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 STX11O75558 287 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ATP1B1P05026 303 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 DBIP07108 87 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 SRMP19623 302 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ANXA7P20073 488 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 DPP4P27487 766 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 TSFMP43897 325 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PTH2RP49190 550 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 CSRP2Q16527 193 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 C2orf27AQ580R0 203 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 NHLRC1Q6VVB1 395 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 FCRLAQ7L513 359 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PRSS41Q7RTY9 318 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 UBE2Q1Q7Z7E8 422 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 PAQR7Q86WK9 346 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 SRFBP1Q8NEF9 429 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 SUSD6Q92537 303 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 NRIP3Q9NQ35 241 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 HCN3Q9P1Z3 774 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 GNG8Q9UK08 70 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 MRPS2Q9Y399 296 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 MRPS23Q9Y3D9 190 aaKnown RBP10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ADAM18Q9Y3Q7 739 aa10.94□□□□□ -0.66
UBE3D-206ENST00000505226 ATG2BQ96BY7 2078 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 ANKRD61A6NGH8 418 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 C4orf47A7E2U8 309 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 NOGQ13253 232 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 SLC25A25Q6KCM7 469 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 UNQ9370/PRO34162Q6UXP9 181 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 OVCH1Q7RTY7 1134 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 RGP1Q92546 391 aaPredicted RBP10.93□□□□□ -0.66
UBE3D-206ENST00000505226 ZNF707Q96C28 371 aaPredicted RBP10.93□□□□□ -0.66
UBE3D-206ENST00000505226 CXorf58Q96LI9 332 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 ERMAPQ96PL5 475 aaPredicted RBP10.93□□□□□ -0.66
UBE3D-206ENST00000505226 DMRTA2Q96SC8 542 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 GPR174Q9BXC1 333 aa10.93□□□□□ -0.66
UBE3D-206ENST00000505226 GNB5O14775 395 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms