RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 KDM4EB2RXH2 506 aaPredicted RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 SULT2B1O00204 365 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 ZNF208O43345 1280 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 GPIP06744 558 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 RAP2AP10114 183 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 UMPSP11172 480 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 RHCEP18577 417 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 RPS5P46782 204 aaKnown RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 CARD18P57730 90 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 RPS3AP61247 264 aaKnown RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 SPIBQ01892 262 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 ST3GAL3Q11203 375 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 MYBPHQ13203 477 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 KPNB1Q14974 876 aaKnown RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 IQCCQ4KMZ1 466 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 FGD3Q5JSP0 725 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 PDSS1Q5T2R2 415 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 TTC33Q6PID6 262 aaPredicted RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 RPTNQ6XPR3 784 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 Q6ZPB1 254 aaPredicted RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 ESPNLQ6ZVH7 1005 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 RPRMLQ8N4K4 120 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 OR52J3Q8NH60 311 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 TMEM255BQ8WV15 326 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 OSTF1Q92882 214 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 POP5Q969H6 163 aaKnown RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 PRSS27Q9BQR3 290 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 CHID1Q9BWS9 393 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 TP63Q9H3D4 680 aaPredicted RBP10.69□□□□□ -0.7
CUX1-210ENST00000497815 COQ10BQ9H8M1 238 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 C12orf10Q9HB07 376 aa10.69□□□□□ -0.7
CUX1-210ENST00000497815 HEATR5AQ86XA9 2040 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 AHRRA9YTQ3 701 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 ADAMDEC1O15204 470 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 WDR1O75083 606 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 PRSS23O95084 383 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 AHSA1O95433 338 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 H1F0P07305 194 aaKnown RBP10.68□□□□□ -0.7
CUX1-210ENST00000497815 THRBP10828 461 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 IMPDH2P12268 514 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 GABRA1P14867 456 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 CBLP22681 906 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 ACVR2AP27037 513 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 IDUAP35475 653 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 CA7P43166 264 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 DIO1P49895 249 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 MAP2K6P52564 334 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 OR2B6P58173 313 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 EGR4Q05215 589 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 TRAM2Q15035 370 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 OR7A5Q15622 319 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 ACSF3Q4G176 576 aaPredicted RBP10.68□□□□□ -0.7
CUX1-210ENST00000497815 C1orf185Q5T7R7 199 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 C1orf140Q5VVS0 124 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 OFCC1Q8IZS5 231 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 C10orf53Q8N6V4 93 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 STK35Q8TDR2 534 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 SLCO4A1Q96BD0 722 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 SLC25A36Q96CQ1 311 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 KTI12Q96EK9 354 aaPredicted RBP10.68□□□□□ -0.7
CUX1-210ENST00000497815 MPP4Q96JB8 637 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 ADGRG7Q96K78 797 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 ZNF347Q96SE7 839 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 SRXN1Q9BYN0 137 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 NMNAT1Q9HAN9 279 aaPredicted RBP10.68□□□□□ -0.7
CUX1-210ENST00000497815 MAN2C1Q9NTJ4 1040 aa10.68□□□□□ -0.7
CUX1-210ENST00000497815 IGHV3-15A0A0B4J1V0 119 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 CCL21O00585 134 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 PIP5K1CO60331 668 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 FKBP6O75344 327 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 GADD45GO95257 159 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 SYNGR4O95473 234 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 KLK2P20151 261 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 FPR1P21462 350 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 FKBP2P26885 142 aaKnown RBP10.67□□□□□ -0.7
CUX1-210ENST00000497815 RRM2P31350 389 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 MAGEA2P43356 314 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 CLK1P49759 484 aaKnown RBP10.67□□□□□ -0.7
CUX1-210ENST00000497815 UGT2B15P54855 530 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 ACTR3P61158 418 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 LSM11P83369 360 aaKnown RBP eCLIP10.67□□□□□ -0.75e-6■■■□□ 16.8
CUX1-210ENST00000497815 PON3Q15166 354 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 RTL6Q6ICC9 239 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 TBPL2Q6SJ96 375 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 LINC00114Q6XXX2 140 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 ZNF730Q6ZMV8 503 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 TMPPEQ6ZT21 453 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 NCCRP1Q6ZVX7 275 aaPredicted RBP10.67□□□□□ -0.7
CUX1-210ENST00000497815 ZNF771Q7L3S4 317 aaPredicted RBP10.67□□□□□ -0.7
CUX1-210ENST00000497815 PIWIL3Q7Z3Z3 882 aaKnown RBP10.67□□□□□ -0.7
CUX1-210ENST00000497815 P4HA3Q7Z4N8 544 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 FJX1Q86VR8 437 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 PIK3C3Q8NEB9 887 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 PFN4Q8NHR9 129 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 ZPLD1Q8TCW7 415 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 TMEM239Q8WW34 195 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 ROBO4Q8WZ75 1007 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 TAAR8Q969N4 342 aa10.67□□□□□ -0.7
CUX1-210ENST00000497815 TMEM43Q9BTV4 400 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms