RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 RGS8P57771 180 aaPredicted RBP14.22□□□□□ -0.13
LIME1-209ENST00000494776 SORDQ00796 357 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 DMTNQ08495 405 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 RASGEF1BQ0VAM2 473 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 EXOC3L2Q2M3D2 409 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 GLIPR1L2Q4G1C9 344 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 TUSC5Q8IXB3 177 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 ZNF295-AS1Q8N0V1 137 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 OR52E4Q8NGH9 312 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 RNF217Q8TC41 542 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 CMTM5Q96DZ9 223 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 C14orf79Q96F83 325 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 TACO1Q9BSH4 297 aaKnown RBP14.22□□□□□ -0.13
LIME1-209ENST00000494776 FANCFQ9NPI8 374 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 PLSCR4Q9NRQ2 329 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 CRIM1Q9NZV1 1036 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 SELENONQ9NZV5 590 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 KLHL13Q9P2N7 655 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 TRAPPC4Q9Y296 219 aa14.22□□□□□ -0.13
LIME1-209ENST00000494776 ELOA3DA6NLF2 546 aaPredicted RBP14.21□□□□□ -0.13
LIME1-209ENST00000494776 SMAD9O15198 467 aaKnown RBP14.21□□□□□ -0.13
LIME1-209ENST00000494776 CYTIPO60759 359 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 CGAP01215 116 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 GZMMP51124 257 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 PCBP3P57721 371 aaKnown RBP14.21□□□□□ -0.13
LIME1-209ENST00000494776 SLC35A1P78382 337 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 FAM27E3Q08E93 113 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 BNIP2Q12982 314 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 ELOA3BQ3SY89 546 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 ERICH5Q6P6B1 374 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 ZNF474Q6S9Z5 364 aaPredicted RBP14.21□□□□□ -0.13
LIME1-209ENST00000494776 ARPINQ7Z6K5 226 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 RANBP3LQ86VV4 465 aaPredicted RBP14.21□□□□□ -0.13
LIME1-209ENST00000494776 TREML1Q86YW5 311 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 ELOA3Q8NG57 546 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 LINC01560Q8TB33 94 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 NAA11Q9BSU3 229 aaPredicted RBP14.21□□□□□ -0.13
LIME1-209ENST00000494776 TRIM2Q9C040 744 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 EVA1AQ9H8M9 152 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 TMEM27Q9HBJ8 222 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 GP6Q9HCN6 339 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 ELOVL5Q9NYP7 299 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 NDRG3Q9UGV2 375 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 AP3M1Q9Y2T2 418 aa14.21□□□□□ -0.13
LIME1-209ENST00000494776 INTS1Q8N201 2190 aaKnown RBP14.21□□□□□ -0.13
LIME1-209ENST00000494776 ZC3H12DA2A288 527 aaKnown RBP14.2□□□□□ -0.14
LIME1-209ENST00000494776 A8MVM7 634 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 DNPH1O43598 174 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 FPR1P21462 350 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 IDUAP35475 653 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 CD79BP40259 229 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 NUDT2P50583 147 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 DUSP7Q16829 419 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 COMTD1Q86VU5 262 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 TMEM200AQ86VY9 491 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 CALHM3Q86XJ0 350 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 OR2T12Q8NG77 320 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 PIGXQ8TBF5 258 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 FAM222BQ8WU58 562 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 RASSF5Q8WWW0 418 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 C3orf49Q96BT1 292 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 ZNF775Q96BV0 537 aaPredicted RBP14.2□□□□□ -0.14
LIME1-209ENST00000494776 HOPXQ9BPY8 73 aaPredicted RBP14.2□□□□□ -0.14
LIME1-209ENST00000494776 PSD2Q9BQI7 771 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 TAPBPLQ9BX59 468 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 RSPO3Q9BXY4 272 aaPredicted RBP14.2□□□□□ -0.14
LIME1-209ENST00000494776 POTEKPQ9BYX7 375 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 KLHL4Q9C0H6 718 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 MYLK2Q9H1R3 596 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 EMC3Q9P0I2 261 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 TESQ9UGI8 421 aaKnown RBP14.2□□□□□ -0.14
LIME1-209ENST00000494776 ARL2BPQ9Y2Y0 163 aa14.2□□□□□ -0.14
LIME1-209ENST00000494776 CCT8L1PA6NM43 557 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 ENO4A6NNW6 628 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 FAM220BPB1ANY3 271 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 EIF1BO60739 113 aaKnown RBP14.19□□□□□ -0.14
LIME1-209ENST00000494776 GCM2O75603 506 aaPredicted RBP14.19□□□□□ -0.14
LIME1-209ENST00000494776 LGI1O95970 557 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 IFNA14P01570 189 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 GPIP06744 558 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 C8BP07358 591 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 IMPDH2P12268 514 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 KLK2P20151 261 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 CEACAM7Q14002 265 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 VEZF1Q14119 521 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 OR7A5Q15622 319 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 ALG10BQ5I7T1 473 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 FBXW10Q5XX13 1052 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 CRYBG3Q68DQ2 2970 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 BEND4Q6ZU67 534 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 NUFIP2Q7Z417 695 aaKnown RBP14.19□□□□□ -0.14
LIME1-209ENST00000494776 ATG4DQ86TL0 474 aaPredicted RBP14.19□□□□□ -0.14
LIME1-209ENST00000494776 LSMEM1Q8N8F7 131 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 DNAJA4Q8WW22 397 aaPredicted RBP14.19□□□□□ -0.14
LIME1-209ENST00000494776 ZNF583Q96ND8 569 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 PRR14Q9BWN1 585 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 BCO1Q9HAY6 547 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 MCCC2Q9HCC0 563 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 ITPR2Q14571 2701 aa14.19□□□□□ -0.14
LIME1-209ENST00000494776 MYO9AB2RTY4 2548 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms