RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 COL8A1P27658 744 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 CPOXP36551 454 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 KIR2DL2P43627 348 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-208ENST00000494334 NCALDP61601 193 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 SELENOWP63302 87 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 MXRA7P84157 204 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 TFF3Q07654 80 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 MYBPHQ13203 477 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 GUSBP1Q15486 140 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 SLC25A35Q3KQZ1 300 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 CYBRD1Q53TN4 286 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 FCRLAQ7L513 359 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 RANBP3LQ86VV4 465 aaPredicted RBP12.11□□□□□ -0.47
COL1A1-208ENST00000494334 DEFB107AQ8IZN7 70 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 RBM15BQ8NDT2 890 aaKnown RBP12.11□□□□□ -0.47
COL1A1-208ENST00000494334 PROX1Q92786 737 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 MCHR1Q99705 422 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 SFXN3Q9BWM7 321 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 POTEKPQ9BYX7 375 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 C12orf10Q9HB07 376 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 NDE1Q9NXR1 346 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 CD300AQ9UGN4 299 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 EGFL7Q9UHF1 273 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 BAG5Q9UL15 447 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 SH3GLB1Q9Y371 365 aa12.11□□□□□ -0.47
COL1A1-208ENST00000494334 SPTBN1Q01082 2364 aaKnown RBP12.1□□□□□ -0.47
COL1A1-208ENST00000494334 A0A0B4J2E0 115 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 A0A1B0GX12 115 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 A8MVM7 634 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 FMO6PO60774 539 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 NPIPB7O75200 414 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 NCK1P16333 377 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 GGT1P19440 569 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 KLK2P20151 261 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 TNFRSF1BP20333 461 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 CSNK2A1P68400 391 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-208ENST00000494334 ALG10BQ5I7T1 473 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 ENTPD8Q5MY95 495 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 EEF1A1P5Q5VTE0 462 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 SP5Q6BEB4 398 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-208ENST00000494334 GTF2IRD2BQ6EKJ0 949 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 GLYATQ6IB77 296 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 VWA1Q6PCB0 445 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 ULK3Q6PHR2 472 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 RINLQ6ZS11 566 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 CBLL1Q75N03 491 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 GTF2IRD2Q86UP8 949 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 TSPYL5Q86VY4 417 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-208ENST00000494334 CARM1Q86X55 608 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 FAM156AQ8NDB6 213 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 RNF128Q8TEB7 428 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 ABHD3Q8WU67 409 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 DNAJA4Q8WW22 397 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-208ENST00000494334 STARD4Q96DR4 205 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 SLC47A1Q96FL8 570 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 GMPPAQ96IJ6 420 aaPredicted RBP12.1□□□□□ -0.47
COL1A1-208ENST00000494334 JKAMPQ9P055 326 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 CLEC4AQ9UMR7 237 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 TRAPPC4Q9Y296 219 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
COL1A1-208ENST00000494334 COL12A1Q99715 3063 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 A0A087WUJ7 227 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 ELOA3DA6NLF2 546 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-208ENST00000494334 SMAD9O15198 467 aaKnown RBP12.09□□□□□ -0.47
COL1A1-208ENST00000494334 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-208ENST00000494334 PRKD3O94806 890 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 SERPINA1P01009 418 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 THY1P04216 161 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 PNMTP11086 282 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 HSD17B1P14061 328 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 TCN1P20061 433 aaPredicted RBP12.09□□□□□ -0.47
COL1A1-208ENST00000494334 OR1E2P47887 323 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 CDH12P55289 794 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 OR2B6P58173 313 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 SIRPAP78324 504 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 EGR4Q05215 589 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 FXNQ16595 210 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 ELOA3BQ3SY89 546 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 SAMD4BQ5PRF9 694 aaKnown RBP12.09□□□□□ -0.47
COL1A1-208ENST00000494334 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 ZNF613Q6PF04 617 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 FAM214BQ7L5A3 538 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 MCEMP1Q8IX19 187 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 CNEP1R1Q8N9A8 125 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 ELOA3Q8NG57 546 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 STK35Q8TDR2 534 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 ADAMTS16Q8TE57 1224 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 SLC38A4Q969I6 547 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 TPD52L3Q96J77 140 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 DOCK7Q96N67 2140 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 PCDHAC1Q9H158 963 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 CHST11Q9NPF2 352 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 GLRX2Q9NS18 164 aa12.09□□□□□ -0.47
COL1A1-208ENST00000494334 USP9YO00507 2555 aaPredicted RBP12.08□□□□□ -0.48
COL1A1-208ENST00000494334 IGKV1D-42A0A075B6H8 117 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 CPSF4LA6NMK7 179 aaKnown RBP12.08□□□□□ -0.48
COL1A1-208ENST00000494334 DNPH1O43598 174 aa12.08□□□□□ -0.48
COL1A1-208ENST00000494334 CYTIPO60759 359 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms