RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 COQ5Q5HYK3 327 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 FBXW10Q5XX13 1052 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 LURAP1LQ8IV03 231 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 CADM2Q8N3J6 435 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 HIPK4Q8NE63 616 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 PIGXQ8TBF5 258 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 RSPO3Q9BXY4 272 aaPredicted RBP20.11■□□□□ 0.81
SNIP1-203ENST00000493916 POTEKPQ9BYX7 375 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 EMC3Q9P0I2 261 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 KLHL14Q9P2G3 628 aa20.11■□□□□ 0.81
SNIP1-203ENST00000493916 PRORSD1PA6NEY8 169 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 FBP2O00757 339 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 PSMB1P20618 241 aaKnown RBP20.1■□□□□ 0.81
SNIP1-203ENST00000493916 CXCR1P25024 350 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 OR2B6P58173 313 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 MTPNP58546 118 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 SLC35A1P78382 337 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 H3F3AP84243 136 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 RBBP4Q09028 425 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 TRMT5Q32P41 509 aaKnown RBP20.1■□□□□ 0.81
SNIP1-203ENST00000493916 NET1Q7Z628 596 aaPredicted RBP20.1■□□□□ 0.81
SNIP1-203ENST00000493916 PTOV1Q86YD1 416 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 GABRG1Q8N1C3 465 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 C11orf65Q8NCR3 313 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 NRGNQ92686 78 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 NINJ1Q92982 152 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 ZNF300Q96RE9 604 aaPredicted RBP20.1■□□□□ 0.81
SNIP1-203ENST00000493916 ZNF607Q96SK3 696 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 SAR1AQ9NR31 198 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 ANGPT4Q9Y264 503 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 GPR52Q9Y2T5 361 aa20.1■□□□□ 0.81
SNIP1-203ENST00000493916 ZC3H12DA2A288 527 aaKnown RBP20.09■□□□□ 0.81
SNIP1-203ENST00000493916 ZNF716A6NP11 495 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 EIF1BO60739 113 aaKnown RBP20.09■□□□□ 0.81
SNIP1-203ENST00000493916 GCM2O75603 506 aaPredicted RBP20.09■□□□□ 0.81
SNIP1-203ENST00000493916 IMPDH2P12268 514 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 OR3A2P47893 321 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 SLC16A1P53985 500 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 KLF10Q13118 480 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 SELPLGQ14242 412 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 CYP51A1Q16850 503 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 GALNT5Q7Z7M9 940 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 BHLHE22Q8NFJ8 381 aaPredicted RBP20.09■□□□□ 0.81
SNIP1-203ENST00000493916 C3orf49Q96BT1 292 aa20.09■□□□□ 0.81
SNIP1-203ENST00000493916 ZNF317Q96PQ6 595 aaPredicted RBP20.09■□□□□ 0.81
SNIP1-203ENST00000493916 KAT8Q9H7Z6 458 aaKnown RBP20.09■□□□□ 0.81
SNIP1-203ENST00000493916 BBIP1A8MTZ0 92 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 DEFB108AA8MXU0 73 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 FRS3O43559 492 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 SERPINB7O75635 380 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 ADSLP30566 484 aaPredicted RBP20.08■□□□□ 0.81
SNIP1-203ENST00000493916 IDUAP35475 653 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 PCBP3P57721 371 aaKnown RBP20.08■□□□□ 0.81
SNIP1-203ENST00000493916 SF3A3Q12874 501 aaKnown RBP eCLIP20.08■□□□□ 0.81
SNIP1-203ENST00000493916 MAPRE2Q15555 327 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 ATG4DQ86TL0 474 aaPredicted RBP20.08■□□□□ 0.81
SNIP1-203ENST00000493916 COMTD1Q86VU5 262 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 CXorf67Q86X51 503 aaPredicted RBP20.08■□□□□ 0.81
SNIP1-203ENST00000493916 DNAJA3Q96EY1 480 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 HDHD5Q9BXW7 423 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 PLEKHF2Q9H8W4 249 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 ST6GALNAC2Q9UJ37 374 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 EDARQ9UNE0 448 aa20.08■□□□□ 0.81
SNIP1-203ENST00000493916 CCDC168Q8NDH2 2452 aa20.08■□□□□ 0.8
SNIP1-203ENST00000493916 CELSR1Q9NYQ6 3014 aa20.08■□□□□ 0.8
SNIP1-203ENST00000493916 A8MVM7 634 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 TMEM229AB2RXF0 380 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 ZNF814B7Z6K7 855 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 GPR171O14626 319 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 SIAH2O43255 324 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 AQP1P29972 269 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 HOXC5Q00444 222 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 CAPRIN1Q14444 709 aaKnown RBP20.07■□□□□ 0.8
SNIP1-203ENST00000493916 P2RY6Q15077 328 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 POU4F3Q15319 338 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 TESK1Q15569 626 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 ANKRD34AQ69YU3 496 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 PAQR6Q6TCH4 344 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 C6orf89Q6UWU4 347 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 Q6ZT83 130 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 C22orf34Q6ZV56 151 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 SLC30A8Q8IWU4 369 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 LSMEM1Q8N8F7 131 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 STEAP2Q8NFT2 490 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 C10orf82Q8WW14 230 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 NAA11Q9BSU3 229 aaPredicted RBP20.07■□□□□ 0.8
SNIP1-203ENST00000493916 ACTR6Q9GZN1 396 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 EVA1AQ9H8M9 152 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 C12orf10Q9HB07 376 aa20.07■□□□□ 0.8
SNIP1-203ENST00000493916 C6orf203Q9P0P8 240 aaPredicted RBP20.07■□□□□ 0.8
SNIP1-203ENST00000493916 LIPT2A6NK58 231 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 SLC22A2O15244 555 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 TPST1O60507 370 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 NPIPB7O75200 414 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 CNOT4O95628 575 aaKnown RBP20.06■□□□□ 0.8
SNIP1-203ENST00000493916 NPPAP01160 153 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 GPIP06744 558 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 THBDP07204 575 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 FPR1P21462 350 aa20.06■□□□□ 0.8
SNIP1-203ENST00000493916 CYLC2Q14093 348 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms