RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 CTBP2P56545 445 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 SELENOWP63302 87 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 SIRPAP78324 504 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 SAMD4BQ5PRF9 694 aaKnown RBP12.5□□□□□ -0.41
CCM2-217ENST00000492883 SP5Q6BEB4 398 aaPredicted RBP12.5□□□□□ -0.41
CCM2-217ENST00000492883 GLYATQ6IB77 296 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 FCRLAQ7L513 359 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 ATG4DQ86TL0 474 aaPredicted RBP12.5□□□□□ -0.41
CCM2-217ENST00000492883 RBM45Q8IUH3 476 aaKnown RBP12.5□□□□□ -0.41
CCM2-217ENST00000492883 ZHX1-C8orf76Q96EF9 292 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 SLC47A1Q96FL8 570 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 LRRC46Q96FV0 321 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 POTEKPQ9BYX7 375 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 C12orf10Q9HB07 376 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 GLRX2Q9NS18 164 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 EGFL7Q9UHF1 273 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 CLEC4AQ9UMR7 237 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 TRAPPC4Q9Y296 219 aa12.5□□□□□ -0.41
CCM2-217ENST00000492883 ZNF407Q9C0G0 2248 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 ZC3H12DA2A288 527 aaKnown RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 CPSF4LA6NMK7 179 aaKnown RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 FMO6PO60774 539 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 SMNDC1O75940 238 aaKnown RBP eCLIP12.49□□□□□ -0.41
CCM2-217ENST00000492883 PMS2P2O95744 297 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 ZNF682O95780 498 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 T-ENOLP0DO92 83 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 GGT1P19440 569 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 TNFRSF1BP20333 461 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 COL8A1P27658 744 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 IDUAP35475 653 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 KIR2DL2P43627 348 aaPredicted RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 OR1E2P47887 323 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 SLC35A1P78382 337 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 ENTPD8Q5MY95 495 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 FKBP9P1Q75LS8 142 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 FAM214BQ7L5A3 538 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 CARM1Q86X55 608 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 SLC43A2Q8N370 569 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 RELL2Q8NC24 303 aaPredicted RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 FAM156AQ8NDB6 213 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 RBM15BQ8NDT2 890 aaKnown RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 OR4D11Q8NGI4 311 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 GMPPAQ96IJ6 420 aaPredicted RBP12.49□□□□□ -0.41
CCM2-217ENST00000492883 TAPBPLQ9BX59 468 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 PIGMQ9H3S5 423 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 EMC9Q9Y3B6 208 aa12.49□□□□□ -0.41
CCM2-217ENST00000492883 RELNP78509 3460 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 A0A0B4J2E0 115 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 A0A1B0GX12 115 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 TNFSF13O75888 250 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 AHSA1O95433 338 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 SERPINA1P01009 418 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 IMPDH2P12268 514 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 HSD17B1P14061 328 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 FPR1P21462 350 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 ASCL1P50553 236 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 CDH12P55289 794 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 CEACAM7Q14002 265 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 NPTX1Q15818 432 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 TMEM201Q5SNT2 666 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 C1orf140Q5VVS0 124 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 ZNF613Q6PF04 617 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 C6orf89Q6UWU4 347 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 DEF8Q6ZN54 512 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 RINLQ6ZS11 566 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 BTLAQ7Z6A9 289 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 LUZP2Q86TE4 346 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 LSRQ86X29 649 aaPredicted RBP12.48□□□□□ -0.41
CCM2-217ENST00000492883 STK35Q8TDR2 534 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 ADAMTS16Q8TE57 1224 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 ABHD3Q8WU67 409 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 SLC38A4Q969I6 547 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 STARD4Q96DR4 205 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
CCM2-217ENST00000492883 KLHL9Q9P2J3 617 aa12.48□□□□□ -0.41
CCM2-217ENST00000492883 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
CCM2-217ENST00000492883 A0A087WUJ7 227 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 TRAPPC13A5PLN9 417 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 TMEM229AB2RXF0 380 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 C19orf84I3L1E1 186 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 SMAD9O15198 467 aaKnown RBP12.47□□□□□ -0.41
CCM2-217ENST00000492883 DNPH1O43598 174 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 EIF1BO60739 113 aaKnown RBP12.47□□□□□ -0.41
CCM2-217ENST00000492883 CYTIPO60759 359 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 SS18L1O75177 396 aaPredicted RBP12.47□□□□□ -0.41
CCM2-217ENST00000492883 GPIP06744 558 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 KLK2P20151 261 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 UQCRC1P31930 480 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 MSX2P35548 267 aaPredicted RBP12.47□□□□□ -0.41
CCM2-217ENST00000492883 CPOXP36551 454 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 TAS2R41P59536 307 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 RASGEF1BQ0VAM2 473 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 OR7A5Q15622 319 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 SPATS1Q496A3 300 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 SWT1Q5T5J6 900 aaKnown RBP12.47□□□□□ -0.41
CCM2-217ENST00000492883 HIST2H2BCQ6DN03 193 aa12.47□□□□□ -0.41
CCM2-217ENST00000492883 VWA1Q6PCB0 445 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms