RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SSX8Q7RTT4 187 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 GRINAQ7Z429 371 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 UBE2J2Q8N2K1 259 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 ZNF781Q8N8C0 355 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 OR4A15Q8NGL6 344 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 NEURL3Q96EH8 262 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 PPP1R36Q96LQ0 422 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 ADAD1Q96M93 576 aaKnown RBP13.61□□□□□ -0.23
COL2A1-207ENST00000490609 INPP5KQ9BT40 448 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 EXOSC3Q9NQT5 275 aaKnown RBP13.61□□□□□ -0.23
COL2A1-207ENST00000490609 SLC17A5Q9NRA2 495 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 TMEM160Q9NX00 188 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 NOP53Q9NZM5 478 aaKnown RBP13.61□□□□□ -0.23
COL2A1-207ENST00000490609 EMC3Q9P0I2 261 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 OSGIN1Q9UJX0 560 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 TRAPPC4Q9Y296 219 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 SLC35A3Q9Y2D2 325 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 WDR45Q9Y484 360 aa13.61□□□□□ -0.23
COL2A1-207ENST00000490609 PRSS51A0A1B0GVH4 220 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 CIB4A0PJX0 185 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 CCT8L1PA6NM43 557 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 DNPH1O43598 174 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 MRPL33O75394 65 aaKnown RBP13.6□□□□□ -0.23
COL2A1-207ENST00000490609 CHRM4P08173 479 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 DHRS4L1P0CG22 281 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 UQCRC2P22695 453 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 IDH2P48735 452 aaKnown RBP13.6□□□□□ -0.23
COL2A1-207ENST00000490609 CLK1P49759 484 aaKnown RBP13.6□□□□□ -0.23
COL2A1-207ENST00000490609 FABP6P51161 128 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 P2RY4P51582 365 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 SRSF2Q01130 221 aaKnown RBP13.6□□□□□ -0.23
COL2A1-207ENST00000490609 SYPL1Q16563 259 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 KRTAP24-1Q3LI83 254 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 C16orf62Q7Z3J2 963 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 ANKFN1Q8N957 763 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 PIGXQ8TBF5 258 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 OIT3Q8WWZ8 545 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 PKNOX2Q96KN3 472 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 SORT1Q99523 831 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 SLC38A1Q9H2H9 487 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 POLE3Q9NRF9 147 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 EXD2Q9NVH0 621 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 TMEM181Q9P2C4 612 aa13.6□□□□□ -0.23
COL2A1-207ENST00000490609 TMED7-TICAM2A0A0A6YYA0 188 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 SLC35F4A4IF30 521 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 GPR171O14626 319 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 CPSF4O95639 269 aaKnown RBP13.59□□□□□ -0.23
COL2A1-207ENST00000490609 IFNA2P01563 188 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 RPS4Y1P22090 263 aaKnown RBP13.59□□□□□ -0.23
COL2A1-207ENST00000490609 IL12AP29459 219 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 OR2B6P58173 313 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 DSCR9P59020 149 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 RAB35Q15286 201 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 PDCD2Q16342 344 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-207ENST00000490609 SPANXN4Q5MJ08 99 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 OR7E24Q6IFN5 339 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 ZNF544Q6NX49 715 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 CLEC2AQ6UVW9 174 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 FBXL14Q8N1E6 418 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 RIBC1Q8N443 379 aaPredicted RBP13.59□□□□□ -0.23
COL2A1-207ENST00000490609 ZNF563Q8TA94 476 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 TMEM158Q8WZ71 300 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 ARL8AQ96BM9 186 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 TESCQ96BS2 214 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 ZNF385AQ96PM9 386 aaKnown RBP13.59□□□□□ -0.23
COL2A1-207ENST00000490609 ADAM19Q9H013 955 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 DCTN4Q9UJW0 460 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 TMED7Q9Y3B3 224 aa13.59□□□□□ -0.23
COL2A1-207ENST00000490609 AGAP5A6NIR3 686 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 ATP6V1G2-DDX39BF2Z307 99 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 F12P00748 615 aaPredicted RBP13.58□□□□□ -0.24
COL2A1-207ENST00000490609 SLC25A16P16260 332 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 CDKN2CP42773 168 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 EFNA4P52798 201 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 VSNL1P62760 191 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 LGALS3BPQ08380 585 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 MPP2Q14168 576 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 COX20Q5RI15 118 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 KLHL17Q6TDP4 642 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 LINGO2Q7L985 606 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 ARFGAP2Q8N6H7 521 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 TMEM99Q8N816 258 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 FAM168AQ92567 244 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 ZIM3Q96PE6 472 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 KCNK17Q96T54 332 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 PRR14Q9BWN1 585 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 CDC42EP3Q9UKI2 254 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 CHST2Q9Y4C5 530 aa13.58□□□□□ -0.24
COL2A1-207ENST00000490609 ZNF208O43345 1280 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 ALDOCP09972 364 aaKnown RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 ZNF16P17020 682 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 IGFBP5P24593 272 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 FKBP2P26885 142 aaKnown RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 TACR3P29371 465 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 APOBEC3AP31941 199 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 ACAA2P42765 397 aaKnown RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 MAGEA8P43361 318 aa13.57□□□□□ -0.24
COL2A1-207ENST00000490609 MAD2L1Q13257 205 aaPredicted RBP13.57□□□□□ -0.24
COL2A1-207ENST00000490609 CASP12Q6UXS9 341 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms