RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 FOXD4Q12950 439 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 TRIM25Q14258 630 aaKnown RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 GTF2IRD2BQ6EKJ0 949 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 CYP2R1Q6VVX0 501 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 ATG4DQ86TL0 474 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 GTF2IRD2Q86UP8 949 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 CYP4Z1Q86W10 505 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 MCEMP1Q8IX19 187 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 RPRMLQ8N4K4 120 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 OR4D11Q8NGI4 311 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 SSC4DQ8WTU2 575 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 CPNE4Q96A23 557 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 CCDC124Q96CT7 223 aaKnown RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 SLC7A6OSQ96CW6 309 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 DNAJA3Q96EY1 480 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 ZNF845Q96IR2 970 aaPredicted RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 CLPTM1LQ96KA5 538 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 DMRTA2Q96SC8 542 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 TAPBPLQ9BX59 468 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 OR11A1Q9GZK7 315 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 ACTR3BQ9P1U1 418 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 FAM32AQ9Y421 112 aaKnown RBP14.13□□□□□ -0.15
C9orf3-219ENST00000488186 ZNF175Q9Y473 711 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 V9GYQ6 96 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 ICE1Q9Y2F5 2266 aa14.13□□□□□ -0.15
C9orf3-219ENST00000488186 HSPB2A8KAH6 182 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 TPST2O60704 377 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 ZG16O60844 167 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 PRKD3O94806 890 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 PLGP00747 810 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-219ENST00000488186 FCGR2AP12318 317 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 ENPP1P22413 925 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 TIMP3P35625 211 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 CDH12P55289 794 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 RAC3P60763 192 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 MYBPHQ13203 477 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 NPTX1Q15818 432 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 HSPB2Q16082 182 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 CTU2Q2VPK5 515 aaKnown RBP14.12□□□□□ -0.15
C9orf3-219ENST00000488186 MTX3Q5HYI7 312 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 SWT1Q5T5J6 900 aaKnown RBP14.12□□□□□ -0.15
C9orf3-219ENST00000488186 RIPPLY2Q5TAB7 128 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 OR2A2Q6IF42 318 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 TMPPEQ6ZT21 453 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 NCCRP1Q6ZVX7 275 aaPredicted RBP14.12□□□□□ -0.15
C9orf3-219ENST00000488186 MRGPRGQ86SM5 289 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 FNDC9Q8TBE3 224 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 STK35Q8TDR2 534 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 ADAMTS16Q8TE57 1224 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 ASB5Q8WWX0 329 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 SLC38A4Q969I6 547 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 SLC41A3Q96GZ6 507 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 PYURFQ96I23 114 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 ADGRG7Q96K78 797 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 UCN2Q96RP3 112 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 POTEKPQ9BYX7 375 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 TRIM15Q9C019 465 aa14.12□□□□□ -0.15
C9orf3-219ENST00000488186 POLR2J2Q9GZM3 115 aaKnown RBP14.12□□□□□ -0.15
C9orf3-219ENST00000488186 POLR2J3Q9H1A7 115 aaKnown RBP14.12□□□□□ -0.15
C9orf3-219ENST00000488186 A0A0B4J2E0 115 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 A0A1B0GX12 115 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 GSC2O15499 205 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 AHSA1O95433 338 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 GPIP06744 558 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 AGAP20933 346 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 GTF2E2P29084 291 aaKnown RBP14.11□□□□□ -0.15
C9orf3-219ENST00000488186 IDUAP35475 653 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 DIO1P49895 249 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 SLC35A1P78382 337 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 FXNQ16595 210 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 C1orf140Q5VVS0 124 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 TTC33Q6PID6 262 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-219ENST00000488186 XKRXQ6PP77 449 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 C5orf46Q6UWT4 87 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 PLXDC2Q6UX71 529 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 MARVELD2Q8N4S9 558 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 C9orf106Q8NAJ2 232 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 CA5BP1Q8WTZ4 195 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 ROBO4Q8WZ75 1007 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 POP5Q969H6 163 aaKnown RBP14.11□□□□□ -0.15
C9orf3-219ENST00000488186 SDCCAG3Q96C92 435 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 INTS12Q96CB8 462 aaKnown RBP14.11□□□□□ -0.15
C9orf3-219ENST00000488186 ASB9Q96DX5 294 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 ARL5BQ96KC2 179 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 ZFP3Q96NJ6 502 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 EPYCQ99645 322 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 NAA11Q9BSU3 229 aaPredicted RBP14.11□□□□□ -0.15
C9orf3-219ENST00000488186 FNDC11Q9BVV2 318 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 CLCF1Q9UBD9 225 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 RIMS3Q9UJD0 308 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 SLC7A7Q9UM01 511 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 TRAPPC4Q9Y296 219 aa14.11□□□□□ -0.15
C9orf3-219ENST00000488186 A0A087WUJ7 227 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 MBD3L4A6NDZ8 208 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 MBD3L3A6NE82 208 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 MBD3L5A6NJ08 208 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 TMEM229AB2RXF0 380 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 KDM4EB2RXH2 506 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-219ENST00000488186 CHP2O43745 196 aa14.1□□□□□ -0.15
C9orf3-219ENST00000488186 EIF1BO60739 113 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms