RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 ATP5SQ99766 215 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 MFFQ9GZY8 342 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 RACGAP1Q9H0H5 632 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 CHMP5Q9NZZ3 219 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 MDFICQ9P1T7 246 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 LNPEPQ9UIQ6 1025 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 GGA2Q9UJY4 613 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 NUP50Q9UKX7 468 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 BARX2Q9UMQ3 279 aaPredicted RBP2.98□□□□□ -1.93
HFM1-208ENST00000488023 USP16Q9Y5T5 823 aa2.98□□□□□ -1.93
HFM1-208ENST00000488023 IGHV3-20A0A0C4DH32 117 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 KBTBD11-OT1A0A1B0GTJ5 212 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 IGLON5A6NGN9 336 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 SAGE2PA6NJ88 616 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ACOT8O14734 319 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 HSD17B6O14756 317 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 SCAMP2O15127 329 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 CXCL13O43927 109 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 NDUFS6O75380 124 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 PPP1R3DO95685 299 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 CLPTM1O96005 669 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ABOP16442 354 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF3P17036 446 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 EIF2S2P20042 333 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 CD82P27701 267 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 PRDX3P30048 256 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 CFHR2P36980 270 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ETV5P41161 510 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 RFX3P48380 749 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 CSRP3P50461 194 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 PSMD4P55036 377 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 PKNOX1P55347 436 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 RAB10P61026 200 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 TPM4P67936 248 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 RAD51Q06609 339 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 DPYSL3Q14195 570 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 GRB7Q14451 532 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 NECTIN1Q15223 517 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZIC1Q15915 447 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 AANATQ16613 207 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 KIAA1644Q3SXP7 199 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 C9orf135Q5VTT2 229 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 FAM219BQ5XKK7 198 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 PVRIGQ6DKI7 326 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 FAM199XQ6PEV8 388 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 C6orf89Q6UWU4 347 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.97□□□□□ -1.93
HFM1-208ENST00000488023 MRPL21Q7Z2W9 205 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 NFE4Q86UQ8 179 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 GPR65Q8IYL9 337 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF100Q8IYN0 542 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 METTL27Q8N6F8 245 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF781Q8N8C0 355 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 C15orf54Q8N8G6 183 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 FBXO36Q8NEA4 188 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 KLHDC9Q8NEP7 349 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 MAPK15Q8TD08 544 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 SETD7Q8WTS6 366 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 CCDC12Q8WUD4 166 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 PIH1D2Q8WWB5 315 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 TM9SF4Q92544 642 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 CD101Q93033 1021 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ARL5BQ96KC2 179 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ACBD6Q9BR61 282 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF670Q9BS34 389 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 CABLES2Q9BTV7 478 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 HOXD1Q9GZZ0 328 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 NHEJ1Q9H9Q4 299 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 BEX1Q9HBH7 125 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF334Q9HCZ1 680 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF71Q9NQZ8 489 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 NANSQ9NR45 359 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF275Q9NSD4 429 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 NUDT15Q9NV35 164 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 ZNF446Q9NWS9 450 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 STOX2Q9P2F5 926 aaPredicted RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 STX18Q9P2W9 335 aaKnown RBP2.97□□□□□ -1.93
HFM1-208ENST00000488023 CLN8Q9UBY8 286 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 CD300AQ9UGN4 299 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 KCNIP3Q9Y2W7 256 aa2.97□□□□□ -1.93
HFM1-208ENST00000488023 KCNE1BA0A087WTH5 132 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 TRBV7-9A0A0J9YWB2 115 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 GOLGA8QA0A0J9YX86 632 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 GFYI3L273 518 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 AIM2O14862 343 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 TYROBPO43914 113 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 OR10H3O60404 316 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 HUS1O60921 280 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 FCN3O75636 299 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 CD48P09326 243 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 SDC1P18827 310 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 FGF9P31371 208 aaPredicted RBP2.96□□□□□ -1.94
HFM1-208ENST00000488023 OPRD1P41143 372 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 TMED10P49755 219 aaKnown RBP2.96□□□□□ -1.94
HFM1-208ENST00000488023 CRYBA2P53672 197 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 IST1P53990 364 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 MAP3K7CLP57077 242 aa2.96□□□□□ -1.94
HFM1-208ENST00000488023 UBE2MP61081 183 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms