RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TOMM20Q15388 145 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 NPTX1Q15818 432 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 ZNF239Q16600 458 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 AGKQ53H12 422 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 MRPL2Q5T653 305 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 ATAD3BQ5T9A4 648 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 RAET1LQ5VY80 246 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 USF3Q68DE3 2245 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 OR2A2Q6IF42 318 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 VWA1Q6PCB0 445 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 ZNF474Q6S9Z5 364 aaPredicted RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 C6orf89Q6UWU4 347 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 NHLRC1Q6VVB1 395 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 PLEKHM3Q6ZWE6 761 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CCDC80Q76M96 950 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 C16orf62Q7Z3J2 963 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 SZRD1Q7Z422 152 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 REC114Q7Z4M0 266 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 GCNT2Q8N0V5 402 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 LILRA2Q8N149 483 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CLIP4Q8N3C7 705 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 LSMEM1Q8N8F7 131 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 GPR32P1Q8NGA4 272 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 OR10D3Q8NH80 312 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 OR2V1Q8NHB1 315 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 FNDC9Q8TBE3 224 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 RNF128Q8TEB7 428 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CNOT9Q92600 299 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 RNASE6Q93091 150 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 DNAJA3Q96EY1 480 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 TMEM19Q96HH6 336 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 SH3YL1Q96HL8 342 aaPredicted RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 BOD1Q96IK1 185 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 TRIB1Q96RU8 372 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CGREF1Q99674 301 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 GPATCH1Q9BRR8 931 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 THUMPD3Q9BV44 507 aaKnown RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 TMEM120AQ9BXJ8 343 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 MYLK2Q9H1R3 596 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 PIGMQ9H3S5 423 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 RAD21L1Q9H4I0 556 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 EXO5Q9H790 373 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 C7orf69Q9H7B7 122 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 TMEM185BQ9H7F4 350 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 BCO1Q9HAY6 547 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 GLRX2Q9NS18 164 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 RLIMQ9NVW2 624 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 CALML5Q9NZT1 146 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 P2RX2Q9UBL9 471 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 LEF1Q9UJU2 399 aaPredicted RBP5.1□□□□□ -1.59
CUX1-208ENST00000485792 CAMK2AQ9UQM7 478 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 TRAPPC4Q9Y296 219 aa5.1□□□□□ -1.59
CUX1-208ENST00000485792 A0A0G2JND7 137 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 SCO2A0A1W2PP80 73 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 SLC22A20A6NK97 555 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 H0Y3Z8 333 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 H3BML4 177 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 NR5A2O00482 541 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 TPST1O60507 370 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 CYTIPO60759 359 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 MFN2O95140 757 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 GOSR1O95249 250 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 PMS2P2O95744 297 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 C8BP07358 591 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 SNRPB2P08579 225 aaKnown RBP5.09□□□□□ -1.59
CUX1-208ENST00000485792 PABPC4LP0CB38 370 aaKnown RBP5.09□□□□□ -1.59
CUX1-208ENST00000485792 UBTFL6P0CB48 400 aaPredicted RBP5.09□□□□□ -1.59
CUX1-208ENST00000485792 TMIGD3P0DMS9 266 aaPredicted RBP5.09□□□□□ -1.59
CUX1-208ENST00000485792 NR2F1P10589 423 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 FCGR2AP12318 317 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 IL7RP16871 459 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 POU3F2P20265 443 aaPredicted RBP5.09□□□□□ -1.59
CUX1-208ENST00000485792 PRKAR1BP31321 381 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 P2RY4P51582 365 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 ZNF41P51814 821 aaPredicted RBP5.09□□□□□ -1.59
CUX1-208ENST00000485792 ARFIP2P53365 341 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 SLC16A1P53985 500 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 SEC24CP53992 1094 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 CRISP3P54108 245 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 STX1BP61266 288 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 HOXC5Q00444 222 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 EGR4Q05215 589 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 KLF10Q13118 480 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 GNA13Q14344 377 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 PON3Q15166 354 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 FXNQ16595 210 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 FAM91A1Q658Y4 838 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 NANOGP8Q6NSW7 305 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 REEP3Q6NUK4 255 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 C3orf33Q6P1S2 294 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 DHRS4L2Q6PKH6 230 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 WDR88Q6ZMY6 472 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 ZNF836Q6ZNA1 936 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 TMPPEQ6ZT21 453 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 FAM214BQ7L5A3 538 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 GRINAQ7Z429 371 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 TSEN54Q7Z6J9 526 aaKnown RBP5.09□□□□□ -1.59
CUX1-208ENST00000485792 PIGWQ7Z7B1 504 aa5.09□□□□□ -1.59
CUX1-208ENST00000485792 SERPINA11Q86U17 422 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms