RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PCDHAC1Q9H158 963 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 BCO1Q9HAY6 547 aa14.2□□□□□ -0.14
UPF3A-208ENST00000484246 ELOVL7A1L3X0 281 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 CCT8L1PA6NM43 557 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 A8MXE2 369 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 SMAD9O15198 467 aaKnown RBP14.19□□□□□ -0.14
UPF3A-208ENST00000484246 CYTIPO60759 359 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 H3F3AP84243 136 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 SORDQ00796 357 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 KRT72Q14CN4 511 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 PDK3Q15120 406 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 FCRLAQ7L513 359 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 DMRTC2Q8IXT2 367 aaPredicted RBP14.19□□□□□ -0.14
UPF3A-208ENST00000484246 CADM2Q8N3J6 435 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 SMYD1Q8NB12 490 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 CCDC197Q8NCU1 140 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 STK35Q8TDR2 534 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 DNAJA4Q8WW22 397 aaPredicted RBP14.19□□□□□ -0.14
UPF3A-208ENST00000484246 OR11A1Q9GZK7 315 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 SLC24A3Q9HC58 644 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 SPAG4Q9NPE6 437 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 TMEM181Q9P2C4 612 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 KLHL9Q9P2J3 617 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 KLHL13Q9P2N7 655 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 TAGLN3Q9UI15 199 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 EMC9Q9Y3B6 208 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 KIAA1549Q9HCM3 1950 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 PCNX3Q9H6A9 2034 aa14.19□□□□□ -0.14
UPF3A-208ENST00000484246 IGKV3D-15A0A087WSY6 115 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 A0A1B0GWA3 101 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 A8MVM7 634 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 EEF1E1-BLOC1S5C9J1V9 151 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 SULT2B1O00204 365 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 EEF1E1O43324 174 aaKnown RBP14.18□□□□□ -0.14
UPF3A-208ENST00000484246 TPST2O60704 377 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 IFNA14P01570 189 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 OPN1SWP03999 348 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 TFPIP10646 304 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 PNMTP11086 282 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 COX6B1P14854 86 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 ENPP1P22413 925 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 CXCR1P25024 350 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 AGTR1P30556 359 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 PSME3P61289 254 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 NCALDP61601 193 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 LIPEQ05469 1076 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 HIST2H2BCQ6DN03 193 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 VWA1Q6PCB0 445 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 C5orf46Q6UWT4 87 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 BTLAQ7Z6A9 289 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 RANBP3LQ86VV4 465 aaPredicted RBP14.18□□□□□ -0.14
UPF3A-208ENST00000484246 OR52E4Q8NGH9 312 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 ABHD3Q8WU67 409 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 ZHX1-C8orf76Q96EF9 292 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 ALG2Q9H553 416 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 PIF1Q9H611 641 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 ING1Q9UK53 422 aaPredicted RBP14.18□□□□□ -0.14
UPF3A-208ENST00000484246 BAG5Q9UL15 447 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 USP22Q9UPT9 525 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 PCNX1Q96RV3 2341 aa14.18□□□□□ -0.14
UPF3A-208ENST00000484246 UNC79Q9P2D8 2635 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ARHGAP21Q5T5U3 1957 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 A0A0B4J2E0 115 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 A0A1B0GX12 115 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ZC3H12DA2A288 527 aaKnown RBP14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ZNF724A8MTY0 619 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 EIF1BO60739 113 aaKnown RBP14.17□□□□□ -0.14
UPF3A-208ENST00000484246 FESP07332 822 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 IMPDH2P12268 514 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 KDELR2P33947 212 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 GSK3BP49841 420 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 SLC16A1P53985 500 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 SLC35A1P78382 337 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 HOXC5Q00444 222 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 NPTX1Q15818 432 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 FXNQ16595 210 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ZNF787Q6DD87 383 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ZNF613Q6PF04 617 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ULK3Q6PHR2 472 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 PGAM4Q8N0Y7 254 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 FITM2Q8N6M3 262 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 CNEP1R1Q8N9A8 125 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 OR6T1Q8NGN1 323 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ROBO4Q8WZ75 1007 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 PSD2Q9BQI7 771 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 WFDC6Q9BQY6 131 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 PLSCR4Q9NRQ2 329 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 ARL8BQ9NVJ2 186 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 SLC9A8Q9Y2E8 581 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 HEATR5AQ86XA9 2040 aa14.17□□□□□ -0.14
UPF3A-208ENST00000484246 NBPF19A0A087WUL8 3843 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 LIPT2A6NK58 231 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 M0R3H8 397 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 PRKD3O94806 890 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 PLGP00747 810 aaPredicted RBP14.16□□□□□ -0.14
UPF3A-208ENST00000484246 IDUAP35475 653 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 CTBP2P56545 445 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 ALG10BQ5I7T1 473 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 PAQR6Q6TCH4 344 aa14.16□□□□□ -0.14
UPF3A-208ENST00000484246 MEX3BQ6ZN04 569 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms