RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 COPS3Q9UNS2 423 aa16.67■□□□□ 0.26
SSR4-209ENST00000482902 PRELID3BQ9Y3B1 194 aa16.67■□□□□ 0.26
SSR4-209ENST00000482902 MDC1Q14676 2089 aaKnown RBP16.67■□□□□ 0.26
SSR4-209ENST00000482902 A0A0B4J203 849 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 TEX46H3BTG2 121 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 PDCD5O14737 125 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 GSTZ1O43708 216 aaPredicted RBP16.66■□□□□ 0.26
SSR4-209ENST00000482902 GMDSO60547 372 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 GKN3PP0CG01 181 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 VEGFCP49767 419 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 SEC13P55735 322 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 PITPNAQ00169 270 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 ENPP2Q13822 863 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 ZNF169Q14929 603 aaPredicted RBP16.66■□□□□ 0.26
SSR4-209ENST00000482902 DEFB134Q4QY38 66 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 ZNF776Q68DI1 518 aaPredicted RBP16.66■□□□□ 0.26
SSR4-209ENST00000482902 ALKAL2Q6UX46 152 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 WDR88Q6ZMY6 472 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 ESPNLQ6ZVH7 1005 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 CEACAM19Q7Z692 300 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 TMEM99Q8N816 258 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 OR52L1Q8NGH7 329 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 PFN4Q8NHR9 129 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 TRAPPC13A5PLN9 417 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 MCRIP1C9JLW8 97 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 E9PI62 339 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 SLC31A1O15431 190 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 PRAF2O60831 178 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 DNAJB6O75190 326 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 SLC35G6P0C7Q6 338 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 MAKP20794 623 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 CBX5P45973 191 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 FXYD6P3P58550 94 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 DUSP8Q13202 625 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 MAPK14Q16539 360 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 MEPCEQ7L2J0 689 aaKnown RBP16.66■□□□□ 0.26
SSR4-209ENST00000482902 NT5CQ8TCD5 201 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 CD180Q99467 661 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 GSDMCQ9BYG8 508 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 PLA2G2FQ9BZM2 168 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 ENKD1Q9H0I2 346 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 TRPV4Q9HBA0 871 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 SIDT1Q9NXL6 827 aaKnown RBP16.66■□□□□ 0.26
SSR4-209ENST00000482902 MGAT4CQ9UBM8 478 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 FBXL2Q9UKC9 423 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 CA5BQ9Y2D0 317 aa16.66■□□□□ 0.26
SSR4-209ENST00000482902 A0A1B0GUH1 482 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 DNASE2O00115 360 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 AIPO00170 330 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 SNRPBP14678 240 aaKnown RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 HTR2AP28223 471 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 CALCRP30988 508 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 GDNFP39905 211 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 ID2Q02363 134 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 RUNX2Q13950 521 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 HLXQ14774 488 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 TRMT12Q53H54 448 aaKnown RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 TMEM255AQ5JRV8 349 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 SFRP4Q6FHJ7 346 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 FBXO42Q6P3S6 717 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 PRSS45Q7RTY3 260 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 HSD17B13Q7Z5P4 300 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 PXKQ7Z7A4 578 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 YAF2Q8IY57 180 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 SAMD14Q8IZD0 417 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 FAM98AQ8NCA5 519 aaKnown RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 FAM71CQ8NEG0 241 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 OR5W2Q8NH69 310 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 SCARB1Q8WTV0 552 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 HS6ST2Q96MM7 605 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 OR2M4Q96R27 311 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 DMRTA2Q96SC8 542 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 NPAS1Q99742 590 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 HCAR1Q9BXC0 346 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 SLC6A17Q9H1V8 727 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 NANSQ9NR45 359 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 C20orf141Q9NUB4 165 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 ZNF223Q9UK11 482 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 GMEB2Q9UKD1 530 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 TRBV23OR9-2A0A075B6M9 112 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 LDOC1O95751 146 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 GIPP09681 153 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 AK4P27144 223 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 METTL11BQ5VVY1 283 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 SMIM4Q8WVI0 70 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 TMEM239Q8WW34 195 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 WDR89Q96FK6 387 aaPredicted RBP16.65■□□□□ 0.26
SSR4-209ENST00000482902 SEC22CQ9BRL7 303 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 ADAP2Q9NPF8 381 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 TRIM36Q9NQ86 728 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 KLHL1Q9NR64 748 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 KLF15Q9UIH9 416 aa16.65■□□□□ 0.26
SSR4-209ENST00000482902 SCN3AQ9NY46 2000 aa16.64■□□□□ 0.26
SSR4-209ENST00000482902 DAPL1A0PJW8 107 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 PRSS38A1L453 326 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 BHLHE40O14503 412 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 P2RX6O15547 441 aa16.64■□□□□ 0.25
SSR4-209ENST00000482902 GALR3O60755 368 aaPredicted RBP16.64■□□□□ 0.25
SSR4-209ENST00000482902 SC5DO75845 299 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms