RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 A0A1B0GUH1 482 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 TCRBV9S1A1TA0A576 114 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 FAM172BPA6NC97 362 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 TRABD2BA6NFA1 517 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 LATO43561 262 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 OR10H3O60404 316 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 MYL2P10916 166 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 ABOP16442 354 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 SERPINA2P20848 420 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 DCKP27707 260 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 PDHA2P29803 388 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 FGF9P31371 208 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-207ENST00000476169 MAP3K8P41279 467 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 IST1P53990 364 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 MFAP2P55001 183 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 MAP3K7CLP57077 242 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 ERVK-16P61578 105 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 RPL8P62917 257 aaKnown RBP3.51□□□□□ -1.85
VPS13D-207ENST00000476169 TNNC1P63316 161 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 ITIH4Q14624 930 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 TEAD2Q15562 447 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 ZIC1Q15915 447 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF718Q3SXZ3 478 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 MUC21Q5SSG8 566 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 DCST2Q5T1A1 773 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 SLC35E4Q6ICL7 350 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 SPATA24Q86W54 205 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 LSMEM2Q8N112 164 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF781Q8N8C0 355 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 OR52H1Q8NGJ2 320 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 OR9G4Q8NGQ1 327 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 DTX3LQ8TDB6 740 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 PAQR8Q8TEZ7 354 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 CA5BP1Q8WTZ4 195 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 STMN2Q93045 179 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 CNRIP1Q96F85 164 aaPredicted RBP3.51□□□□□ -1.85
VPS13D-207ENST00000476169 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 EPYCQ99645 322 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 OR2AG1Q9H205 316 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 GAL3ST2Q9H3Q3 398 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 GLIPR2Q9H4G4 154 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 SPACA1Q9HBV2 294 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 SPHK2Q9NRA0 654 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 ELOVL2Q9NXB9 296 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 MYEF2Q9P2K5 600 aaKnown RBP3.51□□□□□ -1.85
VPS13D-207ENST00000476169 STAP1Q9ULZ2 295 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 AKNAQ7Z591 1439 aa3.51□□□□□ -1.85
VPS13D-207ENST00000476169 IGHV2-70DA0A0C4DH43 119 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 A0A1W2PPV9 198 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SAGE2PA6NJ88 616 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 CCT8L1PA6NM43 557 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 C15orf61A6NNL5 157 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 TRDCB7Z8K6 153 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 RAB29O14966 203 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 TYROBPO43914 113 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 HUS1O60921 280 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 UGT2B17O75795 530 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 AP2A2O94973 939 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SNAI1O95863 264 aaPredicted RBP3.5□□□□□ -1.85
VPS13D-207ENST00000476169 HPP00738 406 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 IGHG3P01860 377 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 TPM3P06753 285 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 MYOGP15173 224 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 BCL3P20749 454 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 CCNOP22674 350 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 MMP12P39900 470 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 OPRL1P41146 370 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 LEPP41159 167 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 DAP3P51398 398 aaKnown RBP3.5□□□□□ -1.85
VPS13D-207ENST00000476169 PKNOX1P55347 436 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SNRPD1P62314 119 aaKnown RBP3.5□□□□□ -1.85
VPS13D-207ENST00000476169 ZNF33BQ06732 778 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SCRN3Q0VDG4 424 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 XRCC4Q13426 336 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 FASTKD3Q14CZ7 662 aaKnown RBP3.5□□□□□ -1.85
VPS13D-207ENST00000476169 GPR157Q5UAW9 335 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 MEDAGQ5VYS4 303 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 REP15Q6BDI9 236 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 C22orf42Q6IC83 251 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 LCLAT1Q6UWP7 414 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 NUFIP2Q7Z417 695 aaKnown RBP3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SMIM29Q86T20 159 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SLC47A2Q86VL8 602 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 ERICH1Q86X53 443 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 NUDCD3Q8IVD9 361 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 MFSD6LQ8IWD5 586 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 OR2L13Q8N349 312 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 OR13C9Q8NGT0 318 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 NDNFQ8TB73 568 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SPPL2AQ8TCT8 520 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 GPR151Q8TDV0 419 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 PIH1D2Q8WWB5 315 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 FAF2Q96CS3 445 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 CCDC126Q96EE4 140 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 MOCOSQ96EN8 888 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 MS4A14Q96JA4 679 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 SLC35A5Q9BS91 424 aa3.5□□□□□ -1.85
VPS13D-207ENST00000476169 PRRG3Q9BZD7 231 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms