RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 C12orf57Q99622 126 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 PRDM9Q9NQV7 894 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 CEP290O15078 2479 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 RP1P56715 2156 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SLC22A23A1A5C7 686 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SUOXP51687 545 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SCAPQ12770 1279 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 P2RY14Q15391 338 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 PCGF3Q3KNV8 242 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SIRPB2Q5JXA9 342 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 TANGO2Q6ICL3 276 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF704Q6ZNC4 412 aaPredicted RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SSX9Q7RTT3 188 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 MCATQ8IVS2 390 aaKnown RBP10.79□□□□□ -0.68
U2AF1-209ENST00000475639 SYT14Q8NB59 555 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 OR11H7Q8NGC8 314 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 OR52P1PQ8NH57 321 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 HAS2Q92819 552 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 NMNAT2Q9BZQ4 307 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 ADAM19Q9H013 955 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 ZCCHC4Q9H5U6 513 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF236Q9UL36 1845 aa10.79□□□□□ -0.68
U2AF1-209ENST00000475639 A0A0A6YYJ9 748 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF860A6NHJ4 632 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 SYT7O43581 403 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 EPOP01588 193 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 MMP3P08254 477 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 LMO2P25791 158 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ITGB7P26010 798 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 RPL13AP40429 203 aaKnown RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 STC1P52823 247 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 SUSD1Q6UWL2 747 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 DEFB132Q7Z7B7 95 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 SVBPQ8N300 66 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 CHCHD4Q8N4Q1 142 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 FUBP1Q96AE4 644 aaKnown RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ZBED3Q96IU2 234 aaPredicted RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 C1QTNF3Q9BXJ4 246 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 GSX2Q9BZM3 304 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 GKN1Q9NS71 199 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 SLCO1C1Q9NYB5 712 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ACOT7O00154 380 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 FADS1O60427 444 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ADAM11O75078 769 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 B3GALT4O96024 378 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 LCATP04180 440 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 PTPRCAPQ14761 206 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 GTF2H5Q6ZYL4 71 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 TMEM151BQ8IW70 566 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 C16orf78Q8WTQ4 265 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ATOH1Q92858 354 aaPredicted RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 UHRF2Q96PU4 802 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 SYNPO2LQ9H987 977 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 KCTD3Q9Y597 815 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 NUP214P35658 2090 aaPredicted RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 GOSR2O14653 212 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 MAGEB4O15481 346 aaPredicted RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 STK17BO94768 372 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 HOXB2P14652 356 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 PXNP49023 591 aaPredicted RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 HSD17B7P56937 341 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 MEX3BQ6ZN04 569 aaKnown RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF679Q8IYX0 411 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF382Q96SR6 550 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 FEVQ99581 238 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 RDH14Q9HBH5 336 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF286AQ9HBT8 521 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF43P17038 809 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 SEC61A1P61619 476 aaKnown RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 ZDHHC1Q8WTX9 485 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 CMSS1Q9BQ75 279 aaKnown RBP10.78□□□□□ -0.68
U2AF1-209ENST00000475639 RBCK1Q9BYM8 510 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 PPP1R3EQ9H7J1 279 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 SAGE1Q9NXZ1 904 aa10.78□□□□□ -0.68
U2AF1-209ENST00000475639 MROH6A6NGR9 719 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 BHLHE40O14503 412 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 SNCGO76070 127 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 LGI1O95970 557 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 C1GALT1C1LP0DN25 315 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 UGT2B7P16662 529 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 CXADRP78310 365 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 FAM209BQ5JX69 171 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 PLEKHS1Q5SXH7 462 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 TMEM107Q6UX40 140 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 OR52E2Q8NGJ4 325 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 ZNF417Q8TAU3 575 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 GPR148Q8TDV2 347 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 SPTSSAQ969W0 71 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 LPAR4Q99677 370 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 PRRT1Q99946 306 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 PDE7BQ9NP56 450 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 PLEKHJ1Q9NW61 149 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 TESQ9UGI8 421 aaKnown RBP10.77□□□□□ -0.68
U2AF1-209ENST00000475639 CYB5R1Q9UHQ9 305 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 RHBDD3Q9Y3P4 386 aa10.77□□□□□ -0.68
U2AF1-209ENST00000475639 LOC105369274A0A096LPK9 316 aa10.77□□□□□ -0.69
U2AF1-209ENST00000475639 C1orf226A1L170 272 aa10.77□□□□□ -0.69
U2AF1-209ENST00000475639 ZBTB42B2RXF5 422 aa10.77□□□□□ -0.69
U2AF1-209ENST00000475639 HRO43593 1189 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms