RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ANK3Q12955 4377 aaKnown RBP6.18□□□□□ -1.42
HDAC3-207ENST00000475549 ATRQ13535 2644 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 HIVEP2P31629 2446 aa6.18□□□□□ -1.42
HDAC3-207ENST00000475549 A0A096LNT2 108 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 TMED7-TICAM2A0A0A6YYA0 188 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 CCDC154A6NI56 674 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ABCD4O14678 606 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 SNNO75324 88 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 AGR2O95994 175 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 PGRP06401 933 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 TFPTP0C1Z6 253 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 RPS4Y1P22090 263 aaKnown RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 EPHA3P29320 983 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 TACR3P29371 465 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 S100A3P33764 101 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 CHI3L1P36222 383 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ACAA2P42765 397 aaKnown RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 CLK1P49759 484 aaKnown RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 P2RY4P51582 365 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 CSNK2A1P68400 391 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 IRX1P78414 480 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 SLC25A3Q00325 362 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 SLC17A1Q14916 467 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 GPAT3Q53EU6 434 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 CEP85LQ5SZL2 805 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ATAD3BQ5T9A4 648 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 B3GLCTQ6Y288 498 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF621Q6ZSS3 439 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 P2RY8Q86VZ1 359 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 LRRC34Q8IZ02 419 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 CLIP4Q8N3C7 705 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ARFGAP2Q8N6H7 521 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 VPS37AQ8NEZ2 397 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 OR52N5Q8NH56 324 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF563Q8TA94 476 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 PNPT1Q8TCS8 783 aaKnown RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 SLC25A43Q8WUT9 341 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 OIT3Q8WWZ8 545 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 HTRA1Q92743 480 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 APH1AQ96BI3 265 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 OR52E6Q96RD3 313 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 PANX1Q96RD7 426 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ADAM19Q9H013 955 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 MTHFD2LQ9H903 347 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 KCNK9Q9NPC2 374 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 NGBQ9NPG2 151 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 TMEM181Q9P2C4 612 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 MALT1Q9UDY8 824 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 RAB21Q9UL25 225 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 TRAPPC4Q9Y296 219 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 NOSIPQ9Y314 301 aaKnown RBP6.17□□□□□ -1.42
HDAC3-207ENST00000475549 TMED7Q9Y3B3 224 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 HDGFL3Q9Y3E1 203 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 COL6A5A8TX70 2615 aa6.17□□□□□ -1.42
HDAC3-207ENST00000475549 IGHV4-30-2A0A087WSY4 118 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 A0A1W2PP18 115 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 CDHR4A6H8M9 788 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 CFAP73A6NFT4 308 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 FAAHO00519 579 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 HDAC3O15379 428 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF208O43345 1280 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 DNPH1O43598 174 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 MRPL33O75394 65 aaKnown RBP6.16□□□□□ -1.42
HDAC3-207ENST00000475549 SNUPNO95149 360 aaKnown RBP6.16□□□□□ -1.42
HDAC3-207ENST00000475549 GKN3PP0CG01 181 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 PRG2P13727 222 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 CD40P25942 277 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 TTKP33981 857 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 IDUAP35475 653 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 SLC1A3P43003 542 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 KHKP50053 298 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 ZNF83P51522 516 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 POLR2HP52434 150 aaKnown RBP6.16□□□□□ -1.42
HDAC3-207ENST00000475549 CLNS1AP54105 237 aaKnown RBP6.16□□□□□ -1.42
HDAC3-207ENST00000475549 OR2B6P58173 313 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 EPS8Q12929 822 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 BNIP2Q12982 314 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 VEZF1Q14119 521 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 DPY19L1Q2PZI1 675 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 MST1LQ2TV78 715 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 GTDC1Q4AE62 458 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 SLC9B1Q4ZJI4 515 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 MRPL2Q5T653 305 aaKnown RBP6.16□□□□□ -1.42
HDAC3-207ENST00000475549 TSPO2Q5TGU0 170 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 C9orf135Q5VTT2 229 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 C11orf71Q6IPW1 123 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 LRRC74BQ6ZQY2 392 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 VRK2Q86Y07 508 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 CMIPQ8IY22 773 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 UBE2J2Q8N2K1 259 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 TMEM99Q8N816 258 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 OR10H5Q8NGA6 315 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 SLC38A5Q8WUX1 472 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 GTPBP3Q969Y2 492 aaKnown RBP6.16□□□□□ -1.42
HDAC3-207ENST00000475549 VPS33AQ96AX1 596 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 ARL8AQ96BM9 186 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 MUCL1Q96DR8 90 aa6.16□□□□□ -1.42
HDAC3-207ENST00000475549 TRMT61AQ96FX7 289 aaKnown RBP6.16□□□□□ -1.42
HDAC3-207ENST00000475549 AURKBQ96GD4 344 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms