RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 SLC25A3Q00325 362 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 LOXL1Q08397 574 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-219ENST00000474042 CASP8Q14790 479 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 DPY19L1Q2PZI1 675 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 CHRFAM7AQ494W8 412 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 ANXA8L1Q5VT79 327 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 OR7E24Q6IFN5 339 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 ZNF544Q6NX49 715 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 CASP12Q6UXS9 341 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 LSRQ86X29 649 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-219ENST00000474042 CCDC103Q8IW40 242 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 FBXL14Q8N1E6 418 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 C17orf78Q8N4C9 275 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 ARFGAP2Q8N6H7 521 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 WDR31Q8NA23 367 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 C1orf162Q8NEQ5 155 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-219ENST00000474042 OR52E4Q8NGH9 312 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 CNOT9Q92600 299 aaKnown RBP11.75□□□□□ -0.53
COPS7B-219ENST00000474042 DNAJA3Q96EY1 480 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 PKNOX2Q96KN3 472 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 SLC38A1Q9H2H9 487 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.75□□□□□ -0.53
COPS7B-219ENST00000474042 TMEM181Q9P2C4 612 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 DCTN4Q9UJW0 460 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 POU2F3Q9UKI9 436 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 TRAPPC4Q9Y296 219 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 SLC9A8Q9Y2E8 581 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
COPS7B-219ENST00000474042 FAM234BA2RU67 622 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 M0R1B8 84 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 HMGN4O00479 90 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 FAAHO00519 579 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 CPSF4O95639 269 aaKnown RBP11.74□□□□□ -0.53
COPS7B-219ENST00000474042 C1QCP02747 245 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 FAM157CP0CG43 387 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 IMPDH2P12268 514 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 SLC25A16P16260 332 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 RPS4Y1P22090 263 aaKnown RBP11.74□□□□□ -0.53
COPS7B-219ENST00000474042 HTR3AP46098 478 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 OR2B6P58173 313 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 VSNL1P62760 191 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 CHRNEQ04844 493 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 IFFO1Q0D2I5 559 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 SPANXN4Q5MJ08 99 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 C1QTNF12Q5T7M4 302 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 HMGN2P46Q86SG4 172 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 NUDCD3Q8IVD9 361 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 CMIPQ8IY22 773 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 LRRC34Q8IZ02 419 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 ZNF525Q8N782 197 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 PPP1R36Q96LQ0 422 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 CCDC115Q96NT0 180 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 TNFRSF13CQ96RJ3 184 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 SORT1Q99523 831 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 SLC35A5Q9BS91 424 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 INPP5KQ9BT40 448 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 SLC17A5Q9NRA2 495 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 SLC7A10Q9NS82 523 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 TMEM160Q9NX00 188 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 MARCOQ9UEW3 520 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-219ENST00000474042 HAO1Q9UJM8 370 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 OSGIN1Q9UJX0 560 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 AMDHD2Q9Y303 409 aa11.74□□□□□ -0.53
COPS7B-219ENST00000474042 TMED7-TICAM2A0A0A6YYA0 188 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 TMEM72A0PK05 275 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 AGAP5A6NIR3 686 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 E9PBE3 544 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 ZNF208O43345 1280 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 EIF1BO60739 113 aaKnown RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 CHRM4P08173 479 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 IDH2P48735 452 aaKnown RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 FABP6P51161 128 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 POLR2HP52434 150 aaKnown RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 CLNS1AP54105 237 aaKnown RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 ABCE1P61221 599 aaKnown RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 SLC35A1P78382 337 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 HPCAP84074 193 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 SLC17A1Q14916 467 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 CHI3L2Q15782 390 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 GPAT3Q53EU6 434 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 TSPO2Q5TGU0 170 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 PAQR6Q6TCH4 344 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 ANKFN1Q8N957 763 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 VPS37AQ8NEZ2 397 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 AENQ8WTP8 325 aaKnown RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 HTRA1Q92743 480 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 TMEM45BQ96B21 275 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 DDIT4LQ96D03 193 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 TRNT1Q96Q11 434 aaKnown RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 TMEM109Q9BVC6 243 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 C20orf27Q9GZN8 174 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 BTNL2Q9UIR0 455 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 CDC42EP3Q9UKI2 254 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.73□□□□□ -0.53
COPS7B-219ENST00000474042 TMED7Q9Y3B3 224 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 RAP2CQ9Y3L5 183 aa11.73□□□□□ -0.53
COPS7B-219ENST00000474042 MALRD1Q5VYJ5 2156 aa11.72□□□□□ -0.53
COPS7B-219ENST00000474042 ZC3H12DA2A288 527 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms