RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PTGDSP41222 190 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 MAGEA4P43358 317 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 NCBP2P52298 156 aaKnown RBP eCLIP3.11□□□□□ -1.91
XRN1-209ENST00000472625 NUDT6P53370 316 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 PGGT1BP53609 377 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 PLTPP55058 493 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 CASP9P55211 416 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 CDH11P55287 796 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 PKNOX1P55347 436 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 SUMO3P55854 103 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 CLDN15P56746 228 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 PIGFQ07326 219 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 GALNT1Q10472 559 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 TRAF3Q13114 568 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 STX5Q13190 355 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 SELENBP1Q13228 472 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 SLC29A2Q14542 456 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 EXOSC7Q15024 291 aaKnown RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 GUSBP1Q15486 140 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 UAP1Q16222 522 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 IMPG1Q17R60 797 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 TECRLQ5HYJ1 363 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 HMBOX1Q6NT76 420 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZCCHC12Q6PEW1 402 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 BHLHB9Q6PI77 547 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZNF474Q6S9Z5 364 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 UGT2A3Q6UWM9 527 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 TMEM108Q6UXF1 575 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 TMEM64Q6YI46 380 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 STAC2Q6ZMT1 411 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 GPRIN3Q6ZVF9 776 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 MTERF4Q7Z6M4 381 aaKnown RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 HIPK1Q86Z02 1210 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR2L13Q8N349 312 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 TEX29Q8N6K0 151 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 C1orf52Q8N6N3 182 aaKnown RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 NATD1Q8N6N6 113 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 BANPQ8N9N5 519 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 CDRT4Q8N9R6 151 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZNF540Q8NDQ6 660 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR2M3Q8NG83 312 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR4F6Q8NGB9 312 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR9A2Q8NGT5 310 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR6Y1Q8NGX8 325 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR10D3Q8NH80 312 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OR2V1Q8NHB1 315 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 METTL6Q8TCB7 284 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 RNF128Q8TEB7 428 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 SMAP2Q8WU79 429 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 KCTD4Q8WVF5 259 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 OIT3Q8WWZ8 545 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 AKAP1Q92667 903 aaKnown RBP eCLIP3.11□□□□□ -1.91
XRN1-209ENST00000472625 EFHD2Q96C19 240 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 NXNL1Q96CM4 212 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZHX1-C8orf76Q96EF9 292 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 PHF21BQ96EK2 531 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 C11orf24Q96F05 449 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 CNRIP1Q96F85 164 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZBED6CLQ96FA7 236 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 MARK4Q96L34 752 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 ZNF681Q96N22 645 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 MS4A4EQ96PG1 132 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 RHNO1Q9BSD3 238 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 REG4Q9BYZ8 158 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 HOXD1Q9GZZ0 328 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 SHARPINQ9H0F6 387 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 DPH5Q9H2P9 285 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 DSN1Q9H410 356 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 FOLH1BQ9HBA9 442 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 RRAGDQ9NQL2 400 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 SLC35C2Q9NQQ7 365 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 KLHL13Q9P2N7 655 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 MID2Q9UJV3 735 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 CES1P1Q9UKY3 287 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 C19orf53Q9UNZ5 99 aaPredicted RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 DTX4Q9Y2E6 619 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 TMED5Q9Y3A6 229 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 MXRA5Q9NR99 2828 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 AKAP6Q13023 2319 aa3.11□□□□□ -1.91
XRN1-209ENST00000472625 FN1P02751 2386 aaKnown RBP3.11□□□□□ -1.91
XRN1-209ENST00000472625 SCN3AQ9NY46 2000 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 A0A087WWL8 130 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 EXOC1LA0A1B0GW35 172 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 A0A1W2PPR1 153 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 FAM234BA2RU67 622 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 MYO1GB0I1T2 1018 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 TMEM233B4DJY2 109 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 UBFD1O14562 309 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 TP73O15350 636 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 RAD51CO43502 376 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 DNPH1O43598 174 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 FADS1O60427 444 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 RSL1D1O76021 490 aaKnown RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 SUPT7LO94864 414 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 SIX3O95343 332 aaPredicted RBP3.1□□□□□ -1.91
XRN1-209ENST00000472625 PSMG1O95456 288 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 AK1P00568 194 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 PDYNP01213 254 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 CHRM2P08172 466 aa3.1□□□□□ -1.91
XRN1-209ENST00000472625 GSTA1P08263 222 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms