RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PRRG2O14669 202 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 SEMA7AO75326 666 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 CCNB2O95067 398 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 PRSS23O95084 383 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 OPN1LWP04000 364 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 HIST1H2ABP04908 130 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 CPN1P15169 458 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 DNAJA1P31689 397 aaKnown RBP15.19■□□□□ 0.02
CCM2-205ENST00000472223 IDUAP35475 653 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 CARD18P57730 90 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 MFSD13AQ14CX5 517 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 ATP6AP1Q15904 470 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 IQCCQ4KMZ1 466 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 PRR30Q53SZ7 412 aaPredicted RBP15.19■□□□□ 0.02
CCM2-205ENST00000472223 C1orf140Q5VVS0 124 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 HBMQ6B0K9 141 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 LINC00114Q6XXX2 140 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 HIST3H2AQ7L7L0 130 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 TSEN54Q7Z6J9 526 aaKnown RBP15.19■□□□□ 0.02
CCM2-205ENST00000472223 ZNF605Q86T29 641 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 NKAIN4Q8IVV8 208 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 TMEM255BQ8WV15 326 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 HIST1H2ACQ93077 130 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 ZNF524Q96C55 264 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 DHRS1Q96LJ7 313 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 NPAS1Q99742 590 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 ALKBH4Q9NXW9 302 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 C6orf203Q9P0P8 240 aaPredicted RBP15.19■□□□□ 0.02
CCM2-205ENST00000472223 TMEM5Q9Y2B1 443 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 U3KQV3 271 aa15.19■□□□□ 0.02
CCM2-205ENST00000472223 KPNA4O00629 521 aaPredicted RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 OR10H3O60404 316 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 SYNGR4O95473 234 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 TPOP07202 933 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 ZNF708P17019 499 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 IL11P20809 199 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 EIF1AXP47813 144 aaKnown RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 LHX2P50458 406 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 HMGA2P52926 109 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 OR2B6P58173 313 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 HSF1Q00613 529 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 CRYZQ08257 329 aaKnown RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 PODNL1Q6PEZ8 512 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 MBOAT2Q6ZWT7 520 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 TSPYL5Q86VY4 417 aaPredicted RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 OR2V1Q8NHB1 315 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 PIGXQ8TBF5 258 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 LRTOMTQ8WZ04 291 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 CENPNQ96H22 339 aaPredicted RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 BARD1Q99728 777 aaKnown RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 PRSS27Q9BQR3 290 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 NAA11Q9BSU3 229 aaPredicted RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 PRRG4Q9BZD6 226 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 DCLRE1BQ9H816 532 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 SPRR3Q9UBC9 169 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 TRAPPC4Q9Y296 219 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 RRP15Q9Y3B9 282 aaKnown RBP15.18■□□□□ 0.02
CCM2-205ENST00000472223 LYVE1Q9Y5Y7 322 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 DNAJC13O75165 2243 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 SPTA1P02549 2419 aa15.18■□□□□ 0.02
CCM2-205ENST00000472223 ZNF407Q9C0G0 2248 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 FIGNL2A6NMB9 653 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 AHRRA9YTQ3 701 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 B8ZZF3 427 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 TNFSF11O14788 317 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 EFNA2O43921 213 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 PMS2P2O95744 297 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 THY1P04216 161 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 GABRA1P14867 456 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 FPR1P21462 350 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 RPS5P46782 204 aaKnown RBP15.17■□□□□ 0.02
CCM2-205ENST00000472223 TDGF1P3P51864 188 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 SLC35A1P78382 337 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 MYBPHQ13203 477 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 EXOC3L2Q2M3D2 409 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 FAM69AQ5T7M9 428 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 PPP4R4Q6NUP7 873 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 TMPPEQ6ZT21 453 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 PRICKLE2Q7Z3G6 844 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 HIPK1Q86Z02 1210 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 ZDHHC13Q8IUH4 622 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 ST6GALNAC3Q8NDV1 305 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 OR6S1Q8NH40 331 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 SLC7A13Q8TCU3 470 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 OSTF1Q92882 214 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 CPNE4Q96A23 557 aaPredicted RBP15.17■□□□□ 0.02
CCM2-205ENST00000472223 SLC25A36Q96CQ1 311 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 SGTBQ96EQ0 304 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 NRBF2Q96F24 287 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 ASPNQ9BXN1 380 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 OR11A1Q9GZK7 315 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 ZNF556Q9HAH1 456 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 MAN2C1Q9NTJ4 1040 aa15.17■□□□□ 0.02
CCM2-205ENST00000472223 MCTS1Q9ULC4 181 aaKnown RBP15.17■□□□□ 0.02
CCM2-205ENST00000472223 PRRC2CQ9Y520 2896 aaKnown RBP15.17■□□□□ 0.02
CCM2-205ENST00000472223 A0A087WUU8 490 aa15.16■□□□□ 0.02
CCM2-205ENST00000472223 TRBV4-1A0A0J9YWV2 114 aa15.16■□□□□ 0.02
CCM2-205ENST00000472223 SH3PXD2BA1X283 911 aa15.16■□□□□ 0.02
CCM2-205ENST00000472223 G3V2T6 193 aa15.16■□□□□ 0.02
CCM2-205ENST00000472223 DNPH1O43598 174 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms