RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 CYP2R1Q6VVX0 501 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 LINC00114Q6XXX2 140 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 C9orf106Q8NAJ2 232 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 CLEC18CQ8NCF0 446 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 ELOA3Q8NG57 546 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 MBD3L2Q8NHZ7 208 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 RNF217Q8TC41 542 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 STK35Q8TDR2 534 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 RND1Q92730 232 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 MCUR1Q96AQ8 359 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 CCDC124Q96CT7 223 aaKnown RBP11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TM9SF2Q99805 663 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 SRXN1Q9BYN0 137 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 POTEKPQ9BYX7 375 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 LRMDAQ9H2I8 198 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TIGARQ9NQ88 270 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 TRAPPC4Q9Y296 219 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 HDGFL3Q9Y3E1 203 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 ZNF175Q9Y473 711 aa11.05□□□□□ -0.64
PRKCB-205ENST00000472066 WIPF3A6NGB9 483 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 SULT2B1O00204 365 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 CHP2O43745 196 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 NPIPB7O75200 414 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 OR5F1O95221 314 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 SYNGR4O95473 234 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 PMS2P2O95744 297 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 LDLRP01130 860 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 IL2RAP01589 272 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 IMPDH2P12268 514 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 CEACAM8P31997 349 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-205ENST00000472066 DIO1P49895 249 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 CSNK2A1P68400 391 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-205ENST00000472066 EGR4Q05215 589 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 MTX3Q5HYI7 312 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 C1orf140Q5VVS0 124 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 LCN8Q6JVE9 175 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 P4HA3Q7Z4N8 544 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 GDF7Q7Z4P5 450 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 TSEN54Q7Z6J9 526 aaKnown RBP11.04□□□□□ -0.64
PRKCB-205ENST00000472066 FAM26EQ8N5C1 309 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 FNDC9Q8TBE3 224 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 CPNE4Q96A23 557 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-205ENST00000472066 DNAJA3Q96EY1 480 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 SLC41A3Q96GZ6 507 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 C7orf34Q96L11 122 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 PRRG4Q9BZD6 226 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 MMADHCQ9H3L0 296 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-205ENST00000472066 RIMS3Q9UJD0 308 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 MCTS1Q9ULC4 181 aaKnown RBP11.04□□□□□ -0.64
PRKCB-205ENST00000472066 SLC7A7Q9UM01 511 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 A4GNTQ9UNA3 340 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 ENPP4Q9Y6X5 453 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 V9GYQ6 96 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 PCNX3Q9H6A9 2034 aa11.04□□□□□ -0.64
PRKCB-205ENST00000472066 IGKV1D-42A0A075B6H8 117 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 A0A0G2JNJ9 132 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 TCRBV5S2A0A599 114 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 J3KTA2 159 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 ZG16O60844 167 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 RCBTB2O95199 551 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 STAMBPO95630 424 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 SEMG1P04279 462 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 THRBP10828 461 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 ENPP1P22413 925 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 IDUAP35475 653 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 YAP1P46937 504 aaKnown RBP11.03□□□□□ -0.64
PRKCB-205ENST00000472066 AGFG1P52594 562 aaKnown RBP11.03□□□□□ -0.64
PRKCB-205ENST00000472066 SMSP52788 366 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 OR2B6P58173 313 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 TAS2R41P59536 307 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 ZNF239Q16600 458 aaKnown RBP11.03□□□□□ -0.64
PRKCB-205ENST00000472066 PPP4R4Q6NUP7 873 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 WDR88Q6ZMY6 472 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 ASRGL1Q7L266 308 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 ROBO4Q8WZ75 1007 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 KTI12Q96EK9 354 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-205ENST00000472066 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 LRGUKQ96M69 825 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 PRSS27Q9BQR3 290 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 TMEM43Q9BTV4 400 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 RNF122Q9H9V4 155 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 NDUFAF4Q9P032 175 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 Q9UFV3 132 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 POMPQ9Y244 141 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 RNF6Q9Y252 685 aa11.03□□□□□ -0.64
PRKCB-205ENST00000472066 TRAV36DV7A0A075B6V5 113 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 IGHV3-15A0A0B4J1V0 119 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 LIPT2A6NK58 231 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 HSPB2A8KAH6 182 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 FFAR1O14842 300 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 DNPH1O43598 174 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 AQP8O94778 261 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 GPIP06744 558 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 FCGR2AP12318 317 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 FPR1P21462 350 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 IFNA8P32881 189 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 RPS5P46782 204 aaKnown RBP11.02□□□□□ -0.65
PRKCB-205ENST00000472066 VLDLRP98155 873 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 ST3GAL3Q11203 375 aa11.02□□□□□ -0.65
PRKCB-205ENST00000472066 HSPB2Q16082 182 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms