RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 FAM71E1Q6IPT2 247 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 GFRALQ6UXV0 394 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 H1FNTQ75WM6 255 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 PRSS45Q7RTY3 260 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 GALNTL5Q7Z4T8 443 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 KIF2BQ8N4N8 673 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 DPP10Q8N608 796 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 NANOGP1Q8N7R0 232 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 RBMXL3Q8N7X1 1067 aaKnown RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF781Q8N8C0 355 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 APCDD1LQ8NCL9 501 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 OR52R1Q8NGF1 315 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF675Q8TD23 568 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF721Q8TF20 911 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF75CPQ92670 426 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZBTB9Q96C00 473 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 SPACA9Q96E40 222 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 MS4A4EQ96PG1 132 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 RASL10BQ96S79 203 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 SECISBP2Q96T21 854 aaKnown RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 DOHHQ9BU89 302 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF717Q9BY31 904 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 TRIM4Q9C037 500 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 AICDAQ9GZX7 198 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 TRIM45Q9H8W5 580 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 MAP6D1Q9H9H5 199 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 MEAF6Q9HAF1 191 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ACSS1Q9NUB1 689 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 PPP1R14DQ9NXH3 145 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 SEC14L3Q9UDX4 400 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 MARCOQ9UEW3 520 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 PLEKHB1Q9UF11 243 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ATP6V1HQ9UI12 483 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZDHHC2Q9UIJ5 367 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 ZNF225Q9UK10 706 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 RALYQ9UKM9 306 aaKnown RBP5.67□□□□□ -1.5
PTCD3-208ENST00000469585 CCDC88CQ9P219 2028 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 FER1L5A0AVI2 2057 aa5.67□□□□□ -1.5
PTCD3-208ENST00000469585 A0A1B0GUH1 482 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 FAM157AC9JC47 383 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 EMC8O43402 210 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 NME2P1O60361 137 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 PLOD3O60568 738 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 DNAJB6O75190 326 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 TBX6O95947 436 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 IL6P05231 212 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ABCB1P08183 1280 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 IFI6P09912 130 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ALOX5P09917 674 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 PLA2G2AP14555 144 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 NAGAP17050 411 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 SDC1P18827 310 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 CNR1P21554 472 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ELAVL4P26378 380 aaKnown RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 PPICP45877 212 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 RFX3P48380 749 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 FUT7Q11130 342 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 GNA13Q14344 377 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 EBPQ15125 230 aaKnown RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 RFTN2Q52LD8 501 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 TNFAIP8L3Q5GJ75 292 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 C6orf136Q5SQH8 315 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 C11orf87Q6NUJ2 197 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 SLC30A6Q6NXT4 461 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ZCCHC12Q6PEW1 402 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 TMEM107Q6UX40 140 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 CHMP1BQ7LBR1 199 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 NUP54Q7Z3B4 507 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 C16orf62Q7Z3J2 963 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 SLC34A3Q8N130 599 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 COX18Q8N8Q8 333 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 CDRT4Q8N9R6 151 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ST6GALNAC3Q8NDV1 305 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 CATSPER1Q8NEC5 780 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 NFAM1Q8NET5 270 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 OR4A15Q8NGL6 344 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 OR9A2Q8NGT5 310 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 CLHC1Q8NHS4 586 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 GPR151Q8TDV0 419 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ADAMTS15Q8TE58 950 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 GRHL3Q8TE85 626 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 TMEM170AQ8WVE7 144 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 OR5P2Q8WZ92 322 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 NR4A3Q92570 626 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 SNRNP40Q96DI7 357 aaKnown RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 CNRIP1Q96F85 164 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 MAGEB18Q96M61 343 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 C7orf26Q96N11 449 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 COL21A1Q96P44 957 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 TBL1XR1Q9BZK7 514 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 RAD21L1Q9H4I0 556 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ARMC7Q9H6L4 198 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 PTGES2Q9H7Z7 377 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ZBTB20Q9HC78 741 aaPredicted RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 EQTNQ9NQ60 294 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 ZCCHC3Q9NUD5 404 aaKnown RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 EXD2Q9NVH0 621 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 FAM120CQ9NX05 1096 aaKnown RBP5.66□□□□□ -1.5
PTCD3-208ENST00000469585 TAS2R7Q9NYW3 318 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms