RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PCDHGA5Q9Y5G8 931 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 FUT1P19526 365 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 SRMP19623 302 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 CD96P40200 585 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 PTH2RP49190 550 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 SIM1P81133 766 aaPredicted RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 PRDX1Q06830 199 aaKnown RBP18.22■□□□□ 0.51
SDF4-205ENST00000465727 CRMP1Q14194 572 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 ABHD17CQ6PCB6 329 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 THSD4Q6ZMP0 1018 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 POMGNT2Q8NAT1 580 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 PFN4Q8NHR9 129 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 BPIFA2Q96DR5 249 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 PEX11GQ96HA9 241 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 LRFN5Q96NI6 719 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 SLC25A32Q9H2D1 315 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 PRDM7Q9NQW5 492 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 FBXL2Q9UKC9 423 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 ZNF780BQ9Y6R6 833 aa18.22■□□□□ 0.51
SDF4-205ENST00000465727 TCRBV16S1A1N1A0A5B0 115 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 HPP00738 406 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 IFNGP01579 166 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 LRG1P02750 347 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 FAUP35544 74 aaKnown RBP18.21■□□□□ 0.51
SDF4-205ENST00000465727 ARHGAP11BQ3KRB8 267 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 TP53I3Q53FA7 332 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 TMEM69Q5SWH9 247 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 COL13A1Q5TAT6 717 aaPredicted RBP18.21■□□□□ 0.51
SDF4-205ENST00000465727 ORAI1Q96D31 301 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 MRPL48Q96GC5 212 aaKnown RBP18.21■□□□□ 0.51
SDF4-205ENST00000465727 ZNF681Q96N22 645 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 MS4A4EQ96PG1 132 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 SLC38A3Q99624 504 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 KLHL31Q9H511 634 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 ATPIF1Q9UII2 106 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 GPR160Q9UJ42 338 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 COPS3Q9UNS2 423 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 CCL26Q9Y258 94 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 TRBV2A0A0J9YWF9 115 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 H3BUI4 141 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 DNASE2O00115 360 aaPredicted RBP18.21■□□□□ 0.51
SDF4-205ENST00000465727 NUPL2O15504 423 aaKnown RBP18.21■□□□□ 0.51
SDF4-205ENST00000465727 FMO6PO60774 539 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 C6P13671 934 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 HOXB3P14651 431 aaPredicted RBP18.21■□□□□ 0.51
SDF4-205ENST00000465727 MPPED2Q15777 294 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 C18orf63Q68DL7 685 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 MFSD12Q6NUT3 480 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 ARHGAP11AQ6P4F7 1023 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 WDR88Q6ZMY6 472 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 SLC39A11Q8N1S5 342 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 KCT2Q8NC54 265 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 C7orf57Q8NEG2 295 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 OR6K3Q8NGY3 331 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 MRPS24Q96EL2 167 aaKnown RBP18.21■□□□□ 0.51
SDF4-205ENST00000465727 NPAS1Q99742 590 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 NRTNQ99748 197 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 FOXJ3Q9UPW0 622 aa18.21■□□□□ 0.51
SDF4-205ENST00000465727 PCDH8O95206 1070 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 CALCBP10092 127 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 CLUP10909 449 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 PTNP21246 168 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 NDUFS1P28331 727 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 P2RX1P51575 399 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 B2MP61769 119 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 PPP2CBP62714 309 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 PPP2CAP67775 309 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 MAT1AQ00266 395 aaKnown RBP18.2■□□□□ 0.5
SDF4-205ENST00000465727 EIF2B5Q13144 721 aaKnown RBP18.2■□□□□ 0.5
SDF4-205ENST00000465727 SPOUT1Q5T280 376 aaKnown RBP18.2■□□□□ 0.5
SDF4-205ENST00000465727 ZNF660Q6AZW8 331 aaPredicted RBP18.2■□□□□ 0.5
SDF4-205ENST00000465727 NHLRC1Q6VVB1 395 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 DGLUCYQ7Z3D6 616 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 OR2L5Q8NG80 312 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 OR13C2Q8NGS9 318 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 C1orf216Q8TAB5 229 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 GCDHQ92947 438 aaPredicted RBP18.2■□□□□ 0.5
SDF4-205ENST00000465727 SLC6A20Q9NP91 592 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 MED31Q9Y3C7 131 aa18.2■□□□□ 0.5
SDF4-205ENST00000465727 IGKV1-8A0A0C4DH67 115 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 F5H5P2 479 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 LYPD3O95274 346 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 APOC3P02656 99 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 PRNPP04156 253 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 ELNP15502 786 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 RPA2P15927 270 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 GGTLC2Q14390 218 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 RBMS2Q15434 407 aaKnown RBP18.19■□□□□ 0.5
SDF4-205ENST00000465727 OR1Q1Q15612 314 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 METRNLQ641Q3 311 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 LINC01555Q8NAE3 123 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 SLC16A11Q8NCK7 471 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 CDS1Q92903 461 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 HAVCR1Q96D42 359 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 ZNF558Q96NG5 402 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 EXOSC3Q9NQT5 275 aaKnown RBP18.19■□□□□ 0.5
SDF4-205ENST00000465727 FXYD6-FXYD2A0A087WZ82 144 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 A0A1W2PS29 197 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 NRG2O14511 850 aaPredicted RBP18.19■□□□□ 0.5
SDF4-205ENST00000465727 PTP4A3O75365 173 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms