RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 A0A1W2PNV4 684 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ELOVL7A1L3X0 281 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FAM221AA4D161 298 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 A8MXE2 369 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FAM220BPB1ANY3 271 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ZNF208O43345 1280 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TGM6O95932 706 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CPOXP36551 454 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 IST1P53990 364 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 RGS8P57771 180 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 RAC3P60763 192 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 NCALDP61601 193 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CSNK2A1P68400 391 aaPredicted RBP11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PLAURQ03405 335 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CTU2Q2VPK5 515 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FAM91A1Q658Y4 838 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CDC20BQ86Y33 519 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ADGRG3Q86Y34 549 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SLC15A3Q8IY34 581 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 MICU2Q8IYU8 434 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FNDC9Q8TBE3 224 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FIG4Q92562 907 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FOXC2Q99958 501 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TRIM2Q9C040 744 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FANCFQ9NPI8 374 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GLRX2Q9NS18 164 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 NDE1Q9NXR1 346 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GALNT8Q9NY28 637 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SELENONQ9NZV5 590 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OSGIN1Q9UJX0 560 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TMED7Q9Y3B3 224 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 HDGFL3Q9Y3E1 203 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CHST2Q9Y4C5 530 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ANKRD17O75179 2603 aaKnown RBP11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 KIAA1549Q9HCM3 1950 aa11.85□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TACC2O95359 2948 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OTOGQ6ZRI0 2925 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CCT8L1PA6NM43 557 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SULT2B1O00204 365 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GSTA4O15217 222 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TPST1O60507 370 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ADAM11O75078 769 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 LGI1O95970 557 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PLGP00747 810 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CCNA2P20248 432 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SHC1P29353 583 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 KCNJ5P48544 419 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SLC7A2P52569 658 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 RIPPLY3P57055 190 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PSME3P61289 254 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 LIPEQ05469 1076 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 DMTNQ08495 405 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 KRT72Q14CN4 511 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SYT14P1Q58G82 188 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TMPPEQ6ZT21 453 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 RANBP3LQ86VV4 465 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SLC43A2Q8N370 569 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SMYD1Q8NB12 490 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OR52E4Q8NGH9 312 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 BCAS4Q8TDM0 211 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 NRGNQ92686 78 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ZHX1-C8orf76Q96EF9 292 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TMEM27Q9HBJ8 222 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CCM2LQ9NUG4 571 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CMTM6Q9NX76 183 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ELOVL5Q9NYP7 299 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ZNF226Q9NYT6 803 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TESQ9UGI8 421 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 BAG5Q9UL15 447 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TRAPPC4Q9Y296 219 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
RAB11FIP3-207ENST00000461009 A0A1W2PNR3 127 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 FRS3O43559 492 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 GMNNO75496 209 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 GCM2O75603 506 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ENPP1P22413 925 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 KDELR2P33947 212 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PCYT1AP49585 367 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 CTBP2P56545 445 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 MXRA7P84157 204 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 KEAP1Q14145 624 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 RNPS1Q15287 305 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 DUSP7Q16829 419 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 C8orf82Q6P1X6 216 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 LSMEM1Q8N8F7 131 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 DNAJA4Q8WW22 397 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 PROX1Q92786 737 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 GMPPAQ96IJ6 420 aaPredicted RBP11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 NSL1Q96IY1 281 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 POTEKPQ9BYX7 375 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ALG2Q9H553 416 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 RNF122Q9H9V4 155 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 C12orf10Q9HB07 376 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 SPAG4Q9NPE6 437 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ARL8BQ9NVJ2 186 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 ADA2Q9NZK5 511 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 SLC9A8Q9Y2E8 581 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 EMC9Q9Y3B6 208 aa11.83□□□□□ -0.52
RAB11FIP3-207ENST00000461009 MPDZO75970 2070 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms