RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 HIPK1Q86Z02 1210 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 SVOPLQ8N434 492 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 LRRC17Q8N6Y2 441 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 PACRGLQ8N7B6 248 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 AQP11Q8NBQ7 271 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ATP6V1C2Q8NEY4 427 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ACOT11Q8WXI4 607 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 KTI12Q96EK9 354 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 NRBF2Q96F24 287 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 FAM46AQ96IP4 442 aaKnown RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 POLR2J2Q9GZM3 115 aaKnown RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 POLR2J3Q9H1A7 115 aaKnown RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF71Q9NQZ8 489 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 LUZP4Q9P127 313 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZGRF1Q86YA3 2104 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ELOA3DA6NLF2 546 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 H0YJX3 145 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZNHIT1O43257 154 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 KLF4O43474 513 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 OR10H3O60404 316 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 SNAP29O95721 258 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 THRBP10828 461 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 PEPDP12955 493 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 HK1P19367 917 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 MAGEA5P43359 124 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 GPR4P46093 362 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF41P51814 821 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 UCNP55089 124 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 DSCR4P56555 118 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 FHL1Q13642 323 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 TOMM20Q15388 145 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ELOA3BQ3SY89 546 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 PLEKHN1Q494U1 663 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 KDM4DQ6B0I6 523 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 C1orf94Q6P1W5 598 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF730Q6ZMV8 503 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 Q6ZPB1 254 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 GRINAQ7Z429 371 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 KIF18BQ86Y91 864 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 TMEM251Q8N6I4 163 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZFP62Q8NB50 900 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 FAM83FQ8NEG4 500 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ELOA3Q8NG57 546 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 DNAJA4Q8WW22 397 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ST8SIA1Q92185 356 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ARL5BQ96KC2 179 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 C5orf34Q96MH7 638 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 TAAR6Q96RI8 345 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ENKD1Q9H0I2 346 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ANKRD19PQ9H560 264 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 PRORYQ9H606 182 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 TMEM185BQ9H7F4 350 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF703Q9H7S9 590 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 REV1Q9UBZ9 1251 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 TMCC3Q9ULS5 477 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 LRCH1Q9Y2L9 728 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 KLF13Q9Y2Y9 288 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF337Q9Y3M9 751 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 LIPGQ9Y5X9 500 aa9.92□□□□□ -0.82
SCN9A-205ENST00000454569 OR2M5A3KFT3 312 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 H0YC42 278 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 MKRN2OSH3BPM6 223 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 SUSD5O60279 629 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 NPIPB7O75200 414 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 TRAPPC6AO75865 159 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 IFI30P13284 250 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 GDF1P27539 372 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 STARP49675 285 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 ALDH3A2P51648 485 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 POLR2HP52434 150 aaKnown RBP9.91□□□□□ -0.82
SCN9A-205ENST00000454569 TPD52P55327 224 aaPredicted RBP9.91□□□□□ -0.82
SCN9A-205ENST00000454569 SMIM11AP58511 58 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 FXYD6P3P58550 94 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 PRKCDQ05655 676 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 CRYZQ08257 329 aaKnown RBP9.91□□□□□ -0.82
SCN9A-205ENST00000454569 NADK2Q4G0N4 442 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 GXYLT1Q4G148 440 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 TTC33Q6PID6 262 aaPredicted RBP9.91□□□□□ -0.82
SCN9A-205ENST00000454569 KLHL17Q6TDP4 642 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 Q6ZS92 163 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 SLC46A3Q7Z3Q1 461 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 ZADH2Q8N4Q0 377 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 EXD3Q8N9H8 876 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 ATG16L2Q8NAA4 619 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 NR4A3Q92570 626 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 TAAR8Q969N4 342 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 MPP4Q96JB8 637 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 ZNF570Q96NI8 536 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 MOGAT1Q96PD6 335 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 MBOAT4Q96T53 435 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 PSD2Q9BQI7 771 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 PTDSS2Q9BVG9 487 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 DEFB127Q9H1M4 99 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 Q9H521 79 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 PTGES2Q9H7Z7 377 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 SEC14L4Q9UDX3 406 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 BOKQ9UMX3 212 aaPredicted RBP9.91□□□□□ -0.82
SCN9A-205ENST00000454569 SLC6A5Q9Y345 797 aa9.91□□□□□ -0.82
SCN9A-205ENST00000454569 A0A1W2PNR3 127 aa9.9□□□□□ -0.82
SCN9A-205ENST00000454569 ENO4A6NNW6 628 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms