RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 WIF1Q9Y5W5 379 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 SAR1BQ9Y6B6 198 aa3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 MN1Q10571 1320 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P21-201ENST00000452483 TRBV9A0A0B4J1U6 114 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 GRID2IPA4D2P6 1211 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 OVOL3O00110 214 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 SULT1C2O00338 296 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 CCSO14618 274 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF195O14628 629 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PRMT5O14744 637 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 EPHB6O15197 1021 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 MSH4O15457 936 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 VAMP5O95183 116 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 RCBTB2O95199 551 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ACTL6AO96019 429 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 GP1BAP07359 652 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 CTRB1P17538 263 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 LHCGRP22888 699 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 CALCRP30988 508 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 BDKRB1P46663 353 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ALDH3B2P48448 385 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 TMED10P49755 219 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 RPL14P50914 215 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 RIPK4P57078 832 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 UBE2MP61081 183 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 RPS18P62269 152 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PITX1P78337 314 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PAX2Q02962 417 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ST3GAL1Q11201 340 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 BNIP2Q12982 314 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 FHL2Q14192 279 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 SLC25A52Q3SY17 297 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PPM1LQ5SGD2 360 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 IDNKQ5T6J7 187 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 KIAA0895LQ68EN5 471 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 CTRB2Q6GPI1 263 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR5M10Q6IEU7 315 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 STEAP1BQ6NZ63 245 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 C3P1Q6ZMU1 363 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 MBOAT1Q6ZNC8 495 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 Q6ZRG5 221 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 SSX6Q7RTT6 188 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 CTU1Q7Z7A3 348 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 TAC4Q86UU9 113 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZFAND4Q86XD8 727 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 RCOR2Q8IZ40 523 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PGAM4Q8N0Y7 254 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZFP82Q8N141 532 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 DHRSXQ8N5I4 330 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 TEX45Q8NA69 505 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF738Q8NE65 137 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR5L2Q8NGL0 311 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 OR6Q1Q8NGQ2 317 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PLPPR1Q8TBJ4 325 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 BADQ92934 168 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 MYDGFQ969H8 173 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PSMG2Q969U7 264 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 CXorf40BQ96DE9 158 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 SDSLQ96GA7 329 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 C10orf90Q96M02 699 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 MBOAT7Q96N66 472 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ZNF641Q96N77 438 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 MCCC1Q96RQ3 725 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ATP5SQ99766 215 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 MICU1Q9BPX6 476 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 NICN1Q9BSH3 213 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 FEM1AQ9BSK4 669 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 DCTN5Q9BTE1 182 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 APOOQ9BUR5 198 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 RACGAP1Q9H0H5 632 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ARRDC1-AS1Q9H2J1 176 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 ALG9Q9H6U8 611 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 C12orf10Q9HB07 376 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PLEKHA1Q9HB21 404 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 BEX1Q9HBH7 125 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 AKIP1Q9NQ31 210 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 BATF3Q9NR55 127 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 STARD5Q9NSY2 213 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 C1orf109Q9NX04 203 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 DUS2Q9NX74 493 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 EIF3KQ9UBQ5 218 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 TESQ9UGI8 421 aaKnown RBP3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 IL36AQ9UHA7 158 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 STUB1Q9UNE7 303 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PPP1R3CQ9UQK1 317 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 AUP1Q9Y679 476 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 FGD5Q6ZNL6 1462 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 PTPRCP08575 1304 aa3.91□□□□□ -1.78
HMGB3P21-201ENST00000452483 GAGE12BA1L429 117 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 GAGE12HA6NDE8 117 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR5K3A6NET4 321 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 SERINC4A6NH21 518 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 A8MVM7 634 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 CLDN34H7C241 214 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 PDHXO00330 501 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 WNT9BO14905 357 aa3.9□□□□□ -1.79
HMGB3P21-201ENST00000452483 IDH3BO43837 385 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms