RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 TRIM15Q9C019 465 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 GORASP2Q9H8Y8 452 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 TAS2R1Q9NYW7 299 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 C6orf203Q9P0P8 240 aaPredicted RBP12.66□□□□□ -0.38
SSBP3-208ENST00000444533 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 ZNF629Q9UEG4 869 aaPredicted RBP12.66□□□□□ -0.38
SSBP3-208ENST00000444533 CD300AQ9UGN4 299 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 PACSIN3Q9UKS6 424 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 TRAPPC4Q9Y296 219 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 PCNX3Q9H6A9 2034 aa12.66□□□□□ -0.38
SSBP3-208ENST00000444533 TMEM72A0PK05 275 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 EBAG9O00559 213 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 DNPH1O43598 174 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 OR2T1O43869 369 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 EFNA2O43921 213 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 RCBTB2O95199 551 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 ITGA2P17301 1181 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 ADORA2A-AS1P86434 159 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 MYBPHQ13203 477 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 CTU2Q2VPK5 515 aaKnown RBP12.65□□□□□ -0.38
SSBP3-208ENST00000444533 MTX3Q5HYI7 312 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 CCDC121Q6ZUS5 278 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 ADGRE4PQ86SQ3 457 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 ATG4DQ86TL0 474 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-208ENST00000444533 RPRMLQ8N4K4 120 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 FAM156AQ8NDB6 213 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 ADAMTS16Q8TE57 1224 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 INTS12Q96CB8 462 aaKnown RBP12.65□□□□□ -0.38
SSBP3-208ENST00000444533 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
SSBP3-208ENST00000444533 MPP4Q96JB8 637 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 ADGRG7Q96K78 797 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 SFXN3Q9BWM7 321 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 KCNJ16Q9NPI9 418 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 RNF6Q9Y252 685 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 MYO7BQ6PIF6 2116 aa12.65□□□□□ -0.38
SSBP3-208ENST00000444533 A0A0B4J2E0 115 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 A0A0G2JNJ9 132 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 A0A1B0GX12 115 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 ARPC2O15144 300 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 CHP2O43745 196 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 DNAJC8O75937 253 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 PRKD3O94806 890 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 CLDN14O95500 239 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 IL18BPO95998 194 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 BMP5P22003 454 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 HTR2AP28223 471 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 SHC1P29353 583 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 CEACAM8P31997 349 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 OR1E2P47887 323 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 BNIP1Q12981 228 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 MFSD13AQ14CX5 517 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 ZNF239Q16600 458 aaKnown RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 SLC25A35Q3KQZ1 300 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 TMEM201Q5SNT2 666 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 C1orf140Q5VVS0 124 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 TTC33Q6PID6 262 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 C6orf89Q6UWU4 347 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 FCRLAQ7L513 359 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 DHFR2Q86XF0 187 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 MARVELD2Q8N4S9 558 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 C10orf53Q8N6V4 93 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 CNEP1R1Q8N9A8 125 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 C9orf106Q8NAJ2 232 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 PIGXQ8TBF5 258 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 ITLN2Q8WWU7 325 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 ZNF524Q96C55 264 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 GMPPAQ96IJ6 420 aaPredicted RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 HSH2DQ96JZ2 352 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 OR11A1Q9GZK7 315 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 PCDHAC1Q9H158 963 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 FANCFQ9NPI8 374 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 DCAF13Q9NV06 445 aaKnown RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 ACTR3BQ9P1U1 418 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 GMPR2Q9P2T1 348 aaKnown RBP12.64□□□□□ -0.39
SSBP3-208ENST00000444533 Q9UFV3 132 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 SLC7A7Q9UM01 511 aa12.64□□□□□ -0.39
SSBP3-208ENST00000444533 MED12Q93074 2177 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 A0A087WUJ7 227 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 WIPF3A6NGB9 483 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 PDE5AO76074 875 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 OR5F1O95221 314 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 TGM6O95932 706 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 THRBP10828 461 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 MSX2P35548 267 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-208ENST00000444533 CRYBA2P53672 197 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 CDH12P55289 794 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 ST3GAL3Q11203 375 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 TRIM25Q14258 630 aaKnown RBP12.63□□□□□ -0.39
SSBP3-208ENST00000444533 OR7A5Q15622 319 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 CLEC18BQ6UXF7 455 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 NCCRP1Q6ZVX7 275 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-208ENST00000444533 VTCN1Q7Z7D3 282 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 COMTD1Q86VU5 262 aa12.63□□□□□ -0.39
SSBP3-208ENST00000444533 CCDC71Q8IV32 467 aaPredicted RBP12.63□□□□□ -0.39
SSBP3-208ENST00000444533 GCNT2Q8N0V5 402 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms