RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 KAT8Q9H7Z6 458 aaKnown RBP21.04■□□□□ 0.96
VARS-217ENST00000440048 BCO1Q9HAY6 547 aa21.04■□□□□ 0.96
VARS-217ENST00000440048 ANGPT4Q9Y264 503 aa21.04■□□□□ 0.96
VARS-217ENST00000440048 TRAPPC4Q9Y296 219 aa21.04■□□□□ 0.96
VARS-217ENST00000440048 TESMINQ9Y4I5 508 aa21.04■□□□□ 0.96
VARS-217ENST00000440048 ZC3H12DA2A288 527 aaKnown RBP21.03■□□□□ 0.96
VARS-217ENST00000440048 TPST1O60507 370 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 CXCR1P25024 350 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 ADSLP30566 484 aaPredicted RBP21.03■□□□□ 0.96
VARS-217ENST00000440048 OR2B6P58173 313 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 RBBP4Q09028 425 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 MAPRE2Q15555 327 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 COQ5Q5HYK3 327 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 REP15Q6BDI9 236 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 NET1Q7Z628 596 aaPredicted RBP21.03■□□□□ 0.96
VARS-217ENST00000440048 STK32CQ86UX6 486 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 SNX32Q86XE0 403 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 ZHX1-C8orf76Q96EF9 292 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 WFIKKN1Q96NZ8 548 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 POLDIP3Q9BY77 421 aaKnown RBP21.03■□□□□ 0.96
VARS-217ENST00000440048 KLHL4Q9C0H6 718 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 TMEM181Q9P2C4 612 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 F8P00451 2351 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 CELSR1Q9NYQ6 3014 aa21.03■□□□□ 0.96
VARS-217ENST00000440048 AKAP9Q99996 3911 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 LOC100653049A0A140TA62 436 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 BBIP1A8MTZ0 92 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 DNPH1O43598 174 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 KRT34O76011 436 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 IMPDH2P12268 514 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 CYLC2Q14093 348 aaPredicted RBP21.02■□□□□ 0.96
VARS-217ENST00000440048 MMEL1Q495T6 779 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 GLIPR1L2Q4G1C9 344 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 ABLIM2Q6H8Q1 611 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 NANOGP8Q6NSW7 305 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 TFAP2EQ6VUC0 442 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 BEND4Q6ZU67 534 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 C3orf49Q96BT1 292 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 LRRC58Q96CX6 371 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 ZNF300Q96RE9 604 aaPredicted RBP21.02■□□□□ 0.96
VARS-217ENST00000440048 CLEC4MQ9H2X3 399 aaPredicted RBP21.02■□□□□ 0.96
VARS-217ENST00000440048 NANOGQ9H9S0 305 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 KLHL28Q9NXS3 571 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 CAPN7Q9Y6W3 813 aa21.02■□□□□ 0.96
VARS-217ENST00000440048 MAP1AP78559 2803 aaPredicted RBP21.01■□□□□ 0.95
VARS-217ENST00000440048 PRORSD1PA6NEY8 169 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 ZNF724A8MTY0 619 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 FXYD1O00168 92 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 MRASO14807 208 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 SERPINB7O75635 380 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 PCBP3P57721 371 aaKnown RBP21.01■□□□□ 0.95
VARS-217ENST00000440048 BNIP2Q12982 314 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 STAC2Q6ZMT1 411 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 CDH24Q86UP0 819 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 ARMC8Q8IUR7 673 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 OR10A6Q8NH74 314 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 ZNF775Q96BV0 537 aaPredicted RBP21.01■□□□□ 0.95
VARS-217ENST00000440048 POTEKPQ9BYX7 375 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 ARMCX1Q9P291 453 aa21.01■□□□□ 0.95
VARS-217ENST00000440048 ZNF814B7Z6K7 855 aa21■□□□□ 0.95
VARS-217ENST00000440048 CASKO14936 926 aa21■□□□□ 0.95
VARS-217ENST00000440048 SLC22A2O15244 555 aa21■□□□□ 0.95
VARS-217ENST00000440048 MFN2O95140 757 aa21■□□□□ 0.95
VARS-217ENST00000440048 GZMMP51124 257 aa21■□□□□ 0.95
VARS-217ENST00000440048 SLC35A1P78382 337 aa21■□□□□ 0.95
VARS-217ENST00000440048 DMTNQ08495 405 aa21■□□□□ 0.95
VARS-217ENST00000440048 ANKRD34AQ69YU3 496 aa21■□□□□ 0.95
VARS-217ENST00000440048 ATG4DQ86TL0 474 aaPredicted RBP21■□□□□ 0.95
VARS-217ENST00000440048 CCDC103Q8IW40 242 aa21■□□□□ 0.95
VARS-217ENST00000440048 NRGNQ92686 78 aa21■□□□□ 0.95
VARS-217ENST00000440048 MED18Q9BUE0 208 aa21■□□□□ 0.95
VARS-217ENST00000440048 FANCFQ9NPI8 374 aa21■□□□□ 0.95
VARS-217ENST00000440048 IGKV3D-15A0A087WSY6 115 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 ZNF716A6NP11 495 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 RAMP1O60894 148 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 GCM2O75603 506 aaPredicted RBP20.99■□□□□ 0.95
VARS-217ENST00000440048 GOSR1O95249 250 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 NPPAP01160 153 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 FPR1P21462 350 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 H3F3AP84243 136 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 PDK3Q15120 406 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 RABL3Q5HYI8 236 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 CDC20BQ86Y33 519 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 BHLHE22Q8NFJ8 381 aaPredicted RBP20.99■□□□□ 0.95
VARS-217ENST00000440048 PIGXQ8TBF5 258 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 SH3GL1Q99961 368 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 PIF1Q9H611 641 aa20.99■□□□□ 0.95
VARS-217ENST00000440048 HIVEP1P15822 2718 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 PRR14LQ5THK1 2151 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 A8MVM7 634 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 TMEM229AB2RXF0 380 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 EIF1BO60739 113 aaKnown RBP20.98■□□□□ 0.95
VARS-217ENST00000440048 HTR2AP28223 471 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 PCGF2P35227 344 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 IDUAP35475 653 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 OR3A2P47893 321 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 SEC24CP53992 1094 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 CEACAM7Q14002 265 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 FBXW10Q5XX13 1052 aa20.98■□□□□ 0.95
VARS-217ENST00000440048 C22orf34Q6ZV56 151 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms