RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ACKR4Q9NPB9 350 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 ZNF71Q9NQZ8 489 aaPredicted RBP18.71■□□□□ 0.59
CHD3-204ENST00000439235 LHX6Q9UPM6 363 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 FAM208BQ5VWN6 2430 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 NINQ8N4C6 2090 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 ENO4A6NNW6 628 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 WISP1O95388 367 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 SFTPCP11686 197 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 OMPP47874 163 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 B3GALT5-AS1P59052 145 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 CRYZQ08257 329 aaKnown RBP18.7■□□□□ 0.58
CHD3-204ENST00000439235 SLC10A1Q14973 349 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 C1orf94Q6P1W5 598 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 MAGEE2Q8TD90 523 aaPredicted RBP18.7■□□□□ 0.58
CHD3-204ENST00000439235 BPIFA2Q96DR5 249 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 SGTBQ96EQ0 304 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 DGCR6LQ9BY27 220 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 ZDHHC11Q9H8X9 412 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 SMURF2Q9HAU4 748 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 MEPEQ9NQ76 525 aaPredicted RBP18.7■□□□□ 0.58
CHD3-204ENST00000439235 ORC6Q9Y5N6 252 aa18.7■□□□□ 0.58
CHD3-204ENST00000439235 HEATR5AQ86XA9 2040 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 TRAV36DV7A0A075B6V5 113 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 GJE1A6NN92 205 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 AHSA1O95433 338 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 GASTP01350 101 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 ALPLP05186 524 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 TFPIP10646 304 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 ZNF26P17031 533 aaPredicted RBP18.69■□□□□ 0.58
CHD3-204ENST00000439235 GSTM3P21266 225 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 CHMP24386 653 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 IGFBP5P24593 272 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 FPR3P25089 353 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 CLK1P49759 484 aaKnown RBP18.69■□□□□ 0.58
CHD3-204ENST00000439235 LSM11P83369 360 aaKnown RBP eCLIP18.69■□□□□ 0.58
CHD3-204ENST00000439235 SYT14P1Q58G82 188 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 C1orf140Q5VVS0 124 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 C19orf48Q6RUI8 117 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 PRICKLE2Q7Z3G6 844 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 ZER1Q7Z7L7 766 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 P3H2Q8IVL5 708 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 ATP6V1C2Q8NEY4 427 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 FAM46AQ96IP4 442 aaKnown RBP18.69■□□□□ 0.58
CHD3-204ENST00000439235 UBL7Q96S82 380 aaPredicted RBP18.69■□□□□ 0.58
CHD3-204ENST00000439235 SLC29A1Q99808 456 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 KRT84Q9NSB2 600 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 POFUT2Q9Y2G5 429 aa18.69■□□□□ 0.58
CHD3-204ENST00000439235 EML6Q6ZMW3 1958 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 H3BML4 177 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 NPIPB7O75200 414 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 CRYABP02511 175 aaKnown RBP18.68■□□□□ 0.58
CHD3-204ENST00000439235 CELA3AP09093 270 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 PEPDP12955 493 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 CDH2P19022 906 aaPredicted RBP18.68■□□□□ 0.58
CHD3-204ENST00000439235 IL11P20809 199 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 GPR4P46093 362 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 DAPP51397 102 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 RAD23AP54725 363 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 RAC1P63000 192 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 FOXK1P85037 733 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 ALDH6A1Q02252 535 aaKnown RBP18.68■□□□□ 0.58
CHD3-204ENST00000439235 EGR4Q05215 589 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 TSPAN31Q12999 210 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 RFX4Q33E94 735 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 PLEKHN1Q494U1 663 aaPredicted RBP18.68■□□□□ 0.58
CHD3-204ENST00000439235 RNFT1Q5M7Z0 435 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 KDM4DQ6B0I6 523 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 GALNT4Q8N4A0 578 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 OR6S1Q8NH40 331 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 GTPBP3Q969Y2 492 aaKnown RBP18.68■□□□□ 0.58
CHD3-204ENST00000439235 POTEKPQ9BYX7 375 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 UCK2Q9BZX2 261 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 OR11A1Q9GZK7 315 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 PAPOLBQ9NRJ5 636 aaKnown RBP18.68■□□□□ 0.58
CHD3-204ENST00000439235 C20orf141Q9NUB4 165 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 ENOPH1Q9UHY7 261 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 AP4B1Q9Y6B7 739 aa18.68■□□□□ 0.58
CHD3-204ENST00000439235 TNRC6AQ8NDV7 1962 aaKnown RBP18.68■□□□□ 0.58
CHD3-204ENST00000439235 PTPRQQ9UMZ3 2332 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 ZC3H12DA2A288 527 aaKnown RBP18.67■□□□□ 0.58
CHD3-204ENST00000439235 EFCAB9A8MZ26 197 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 OR2T1O43869 369 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 EFNA2O43921 213 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 IDUAP35475 653 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 GSSP48637 474 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 GFRA1P56159 465 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 COX10Q12887 443 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 NADK2Q4G0N4 442 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 FAM69AQ5T7M9 428 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 CD300LDQ6UXZ3 194 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 TMPRSS11FQ6ZWK6 438 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 C10orf53Q8N6V4 93 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 KTI12Q96EK9 354 aaPredicted RBP18.67■□□□□ 0.58
CHD3-204ENST00000439235 RDH12Q96NR8 316 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 NIPSNAP1Q9BPW8 284 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 SLC6A15Q9H2J7 730 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 LDAHQ9H6V9 325 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 TMEM185BQ9H7F4 350 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 HDGFL3Q9Y3E1 203 aa18.67■□□□□ 0.58
CHD3-204ENST00000439235 ZNF337Q9Y3M9 751 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms