RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PDK3Q15120 406 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 ABLIM2Q6H8Q1 611 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 STAC2Q6ZMT1 411 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 NUFIP2Q7Z417 695 aaKnown RBP22■■□□□ 1.11
RAPGEF1-206ENST00000438647 SERPINA11Q86U17 422 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 C11orf65Q8NCR3 313 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 BHLHE22Q8NFJ8 381 aaPredicted RBP22■■□□□ 1.11
RAPGEF1-206ENST00000438647 PIGXQ8TBF5 258 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 OR10A4Q9H209 315 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 AKAP9Q99996 3911 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 CCDC168Q8NDH2 2452 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 PRG2P13727 222 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 ADSLP30566 484 aaPredicted RBP21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 MTPNP58546 118 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 SLC35A1P78382 337 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 ADRM1Q16186 407 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 TRMT5Q32P41 509 aaKnown RBP21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 COQ5Q5HYK3 327 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 DHRS4L2Q6PKH6 230 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 POTEKPQ9BYX7 375 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 SAR1AQ9NR31 198 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 ING1Q9UK53 422 aaPredicted RBP21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 GPR52Q9Y2T5 361 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 ABCA4P78363 2273 aa21.99■■□□□ 1.11
RAPGEF1-206ENST00000438647 IGKV3D-15A0A087WSY6 115 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 BBIP1A8MTZ0 92 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 HRGP04196 525 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 PSMB1P20618 241 aaKnown RBP21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 SF3A3Q12874 501 aaKnown RBP eCLIP21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 KLF10Q13118 480 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 CYLC2Q14093 348 aaPredicted RBP21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 MMEL1Q495T6 779 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 GALNT5Q7Z7M9 940 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 SLC30A8Q8IWU4 369 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 SH3GL1Q99961 368 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 NAA11Q9BSU3 229 aaPredicted RBP21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 HDHD5Q9BXW7 423 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 SLC13A4Q9UKG4 626 aa21.98■■□□□ 1.11
RAPGEF1-206ENST00000438647 GPR171O14626 319 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 KLK2P20151 261 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 CRYGSP22914 178 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 DNAJA1P31689 397 aaKnown RBP21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 IDUAP35475 653 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 OR3A2P47893 321 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 STEAP2Q8NFT2 490 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 NINJ1Q92982 152 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 DNAJA3Q96EY1 480 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 ZNF300Q96RE9 604 aaPredicted RBP21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 KAT8Q9H7Z6 458 aaKnown RBP21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 EVA1AQ9H8M9 152 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 RPS6KB2Q9UBS0 482 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 ITGB1BP2Q9UKP3 347 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 OTOGQ6ZRI0 2925 aa21.97■■□□□ 1.11
RAPGEF1-206ENST00000438647 A8MVM7 634 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 FRS3O43559 492 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 NPPAP01160 153 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 GPIP06744 558 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 AQP1P29972 269 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 NCALDP61601 193 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 H3F3AP84243 136 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 P2RY6Q15077 328 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 ANKRD34AQ69YU3 496 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 PTOV1Q86YD1 416 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 ARMC8Q8IUR7 673 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 GABRG1Q8N1C3 465 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 C3orf49Q96BT1 292 aa21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 ZNF317Q96PQ6 595 aaPredicted RBP21.96■■□□□ 1.11
RAPGEF1-206ENST00000438647 ZC3H12DA2A288 527 aaKnown RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 ZNF716A6NP11 495 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 FBP2O00757 339 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 SLC22A2O15244 555 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 IMPDH2P12268 514 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 FPR1P21462 350 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 SLC16A1P53985 500 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 SELPLGQ14242 412 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 CAPRIN1Q14444 709 aaKnown RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 POU4F3Q15319 338 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 PAQR6Q6TCH4 344 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 Q6ZT83 130 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 NET1Q7Z628 596 aaPredicted RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 CXorf67Q86X51 503 aaPredicted RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 ZNF100Q8IYN0 542 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 PCYOX1LQ8NBM8 494 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 NRGNQ92686 78 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 ZNF775Q96BV0 537 aaPredicted RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 ZC3HAV1LQ96H79 300 aaKnown RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 USB1Q9BQ65 265 aaKnown RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 TAPBPLQ9BX59 468 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 ACTR6Q9GZN1 396 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 C12orf10Q9HB07 376 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 ST6GALNAC2Q9UJ37 374 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 NOSIPQ9Y314 301 aaKnown RBP21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 CAPN7Q9Y6W3 813 aa21.95■■□□□ 1.1
RAPGEF1-206ENST00000438647 GCM2O75603 506 aaPredicted RBP21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 CNOT4O95628 575 aaKnown RBP21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 PCBP3P57721 371 aaKnown RBP21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 HOXC5Q00444 222 aa21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 INTS11Q5TA45 600 aaKnown RBP21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 ATG4DQ86TL0 474 aaPredicted RBP21.94■■□□□ 1.1
RAPGEF1-206ENST00000438647 LURAP1LQ8IV03 231 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms