RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PRSS58Q8IYP2 241 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ENTHD1Q8IYW4 607 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 METTL4Q8N3J2 472 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 C2orf73Q8N5S3 287 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 C1orf52Q8N6N3 182 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CCDC71LQ8N9Z2 235 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 LMNTD1Q8N9Z9 388 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PNLDC1Q8NA58 520 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ACVR1CQ8NER5 493 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR5T2Q8NGG2 359 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR56A4Q8NGH8 313 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR10Z1Q8NGY1 313 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 RP9Q8TA86 221 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 FGFBP3Q8TAT2 258 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 MAGEE2Q8TD90 523 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TFGQ92734 400 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 BADQ92934 168 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 MYDGFQ969H8 173 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TSACCQ96A04 125 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ISOC2Q96AB3 205 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM143Q96AN5 459 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CMTM5Q96DZ9 223 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 NUS1Q96E22 293 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF75AQ96N20 296 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZFP3Q96NJ6 502 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PRAP1Q96NZ9 151 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PRRT1Q99946 306 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ECSITQ9BQ95 431 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 FEM1AQ9BSK4 669 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 BCL2L14Q9BZR8 327 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SPRY4Q9C004 299 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TRIM4Q9C037 500 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 NPFFR1Q9GZQ6 430 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLITRK2Q9H156 845 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 IKZF5Q9H5V7 419 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF665Q9H7R5 613 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 GPN2Q9H9Y4 310 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PLEKHA1Q9HB21 404 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZDHHC4Q9NPG8 344 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 NANSQ9NR45 359 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 FGF21Q9NSA1 209 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 DCAF13Q9NV06 445 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PLEKHJ1Q9NW61 149 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 RMND1Q9NWS8 449 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SIGLEC8Q9NYZ4 499 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 MAT2BQ9NZL9 334 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CYB5R1Q9UHQ9 305 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ERGIC3Q9Y282 383 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SPIN1Q9Y657 262 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 RPAP1Q9BWH6 1393 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PTPRCP08575 1304 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 A0A0J9YVX5 310 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 A0A1B0GTI1 187 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 A0A1W2PNV4 684 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 SAGE2PA6NJ88 616 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 CENPXA8MT69 81 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF732B4DXR9 585 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 NPIPA7E9PJI5 369 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 LMO7DNF2Z398 122 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 SOCS2O14508 198 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 DVL1O14640 695 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 GOSR2O14653 212 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 RRHO14718 337 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 SH2D1BO14796 132 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 CASKO14936 926 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 SGCEO43556 437 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 DIRAS1O95057 198 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 NXPH2O95156 264 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 PSMG1O95456 288 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 IFNA5P01569 189 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 HLA-HP01893 362 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 APOEP02649 317 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 PET100P0DJ07 73 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 NPIPA8P0DM63 369 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 HSPD1P10809 573 aaKnown RBP3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 CD58P19256 250 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 AOC1P19801 751 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 PGCP20142 388 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZP3P21754 424 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 IDSP22304 550 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 AADACP22760 399 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 CXCR2P25025 360 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 TGFBR2P37173 567 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 RPL13AP40429 203 aaKnown RBP3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 MATKP42679 507 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR3A3P47888 321 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 GLUD2P49448 558 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 RAP1GDS1P52306 607 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 UBE2KP61086 200 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 MFGE8Q08431 387 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 TPBGQ13641 420 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 CEACAM7Q14002 265 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 VGLL4Q14135 290 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 DPYSL3Q14195 570 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 MEF2DQ14814 521 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR4D1Q15615 310 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 TRIP6Q15654 476 aaKnown RBP3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 SNAI3Q3KNW1 292 aa3.19□□□□□ -1.9
HMGB1P12-201ENST00000438594 KRTAP27-1Q3LI81 207 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms