RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ERP29P30040 261 aaKnown RBP9.57□□□□□ -0.88
CD44-210ENST00000434472 RPL4P36578 427 aaKnown RBP9.57□□□□□ -0.88
CD44-210ENST00000434472 ADH7P40394 386 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 C1orf61Q13536 156 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 CCINQ13939 588 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 CDK5R1Q15078 307 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 ELOCQ15369 112 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 TATDN3Q17R31 274 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 OVCH1Q7RTY7 1134 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 NR2C2APQ86WQ0 139 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 ZNF761Q86XN6 746 aaPredicted RBP9.57□□□□□ -0.88
CD44-210ENST00000434472 SLITRK4Q8IW52 837 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 UBE2J2Q8N2K1 259 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 BCORP1Q8N888 145 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 SAMD12Q8N8I0 201 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 ZNF527Q8NB42 609 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 SDR9C7Q8NEX9 313 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 OR4M1Q8NGD0 313 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 OR4N2Q8NGD1 307 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 OR5J2Q8NH18 312 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 OR14A16Q8NHC5 309 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 TRMT10AQ8TBZ6 339 aaKnown RBP9.57□□□□□ -0.88
CD44-210ENST00000434472 HAVCR2Q8TDQ0 301 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 SNX33Q8WV41 574 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 THAP4Q8WY91 577 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 GHSRQ92847 366 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 SMIM19Q96E16 107 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 SPACA7Q96KW9 195 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 DMRTB1Q96MA1 342 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 THAP7Q9BT49 309 aaPredicted RBP9.57□□□□□ -0.88
CD44-210ENST00000434472 WACQ9BTA9 647 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 OR10A5Q9H207 317 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 ZCCHC4Q9H5U6 513 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 NLKQ9UBE8 527 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 CYP8B1Q9UNU6 501 aa9.57□□□□□ -0.88
CD44-210ENST00000434472 A0A0G2JMP0 313 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 A0A0X1KG70 313 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 A8MV72 311 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 ZNF879B4DU55 563 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 INMT-MINDY4F8WBC2 141 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 H0YIG0 161 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 IMPA2O14732 288 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 PDCD5O14737 125 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 FLRT2O43155 660 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ARHGEF9O43307 516 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 HCRTR1O43613 425 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 EIF4EP06730 217 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 AHCYP23526 432 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ACVR1BP36896 505 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 GRK6P43250 576 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 CAPZBP47756 277 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 FASLGP48023 281 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 GDI2P50395 445 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 SIRPAP78324 504 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 MADCAM1Q13477 382 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 TP53I3Q53FA7 332 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 WBP2NLQ6ICG8 309 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 GKN2Q86XP6 184 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 SFTPA2Q8IWL1 248 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 SHISA5Q8N114 240 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 Q8N9G6 341 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 NLGN4YQ8NFZ3 816 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 OR4M2Q8NGB6 313 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 OR4K13Q8NH42 304 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ZMYND19Q96E35 227 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 RNF170Q96K19 258 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 GPX7Q96SL4 187 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 GDF15Q99988 308 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 C7orf50Q9BRJ6 194 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 GPR174Q9BXC1 333 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 RBCK1Q9BYM8 510 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 CHRNA10Q9GZZ6 450 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 RANGRFQ9HD47 186 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 NRIP3Q9NQ35 241 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 EXOSC3Q9NQT5 275 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 KLHL1Q9NR64 748 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 SLC2A4RGQ9NR83 387 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 LRIT1Q9P2V4 623 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 EPHA6Q9UF33 1036 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 MRTO4Q9UKD2 239 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 CLCA3PQ9Y6N3 262 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 GOLGA4Q13439 2230 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 A0A0B4J293 547 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 A0A1B0GTQ1 180 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 A0A1W2PRG6 482 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 MCIDASD6RGH6 385 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 TGFBR3LH3BV60 316 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 DVL2O14641 736 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 ADAM11O75078 769 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 FZD7O75084 574 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 DHFRP00374 187 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 TFP02787 698 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 IFNA16P05015 189 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 GYPBP06028 91 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 UCHL1P09936 223 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 CT45A8P0DMV1 189 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 CT45A9P0DMV2 189 aa9.56□□□□□ -0.88
CD44-210ENST00000434472 APEHP13798 732 aaKnown RBP9.56□□□□□ -0.88
CD44-210ENST00000434472 EDNRAP25101 427 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms