RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 EIF1AYO14602 144 aaKnown RBP11.13□□□□□ -0.63
USP40-205ENST00000430158 TNFSF11O14788 317 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 FFAR1O14842 300 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 GYG2O15488 501 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 SEC14L5O43304 696 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 CXCL13O43927 109 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ATP5HO75947 161 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 PRSS23O95084 383 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 IMPDH2P12268 514 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 KLK2P20151 261 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ME2P23368 584 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 FKBP2P26885 142 aaKnown RBP11.13□□□□□ -0.63
USP40-205ENST00000430158 SFTPDP35247 375 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 TIMP3P35625 211 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 CASP6P55212 293 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 CDH12P55289 794 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 COPZ1P61923 177 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 CDSNQ15517 529 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 DNAL1Q4LDG9 190 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ENTPD8Q5MY95 495 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 LCN8Q6JVE9 175 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ZNF613Q6PF04 617 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ULK3Q6PHR2 472 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 B3GNT6Q6ZMB0 384 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 TMPPEQ6ZT21 453 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ASRGL1Q7L266 308 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
USP40-205ENST00000430158 NAXEQ8NCW5 288 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 VANGL1Q8TAA9 524 aaPredicted RBP11.13□□□□□ -0.63
USP40-205ENST00000430158 SLC25A43Q8WUT9 341 aaPredicted RBP11.13□□□□□ -0.63
USP40-205ENST00000430158 DNAJA4Q8WW22 397 aaPredicted RBP11.13□□□□□ -0.63
USP40-205ENST00000430158 SMPDL3BQ92485 455 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 OSTF1Q92882 214 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 FAM162AQ96A26 154 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 TPD52L3Q96J77 140 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 PRSS27Q9BQR3 290 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ZNF426Q9BUY5 554 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 POTEKPQ9BYX7 375 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 LRMDAQ9H2I8 198 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ADPRHL2Q9NX46 363 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ALKBH4Q9NXW9 302 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 SLC13A4Q9UKG4 626 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 A4GNTQ9UNA3 340 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 SLC9A8Q9Y2E8 581 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ZNF175Q9Y473 711 aa11.13□□□□□ -0.63
USP40-205ENST00000430158 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 FLNBO75369 2602 aaKnown RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 HECTD1Q9ULT8 2610 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 ADGRG4Q8IZF6 3080 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 A0A0G2JNJ9 132 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 GJE1A6NN92 205 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 FTCDNL1E5RQL4 147 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 RNF223E7ERA6 249 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 DNAJC8O75937 253 aaPredicted RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 AQP8O94778 261 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 PRKD3O94806 890 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 ZNF682O95780 498 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 CCNA2P20248 432 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 AGFG1P52594 562 aaKnown RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 CARD18P57730 90 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 RAC3P60763 192 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 PMPCAQ10713 525 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 MYBPHQ13203 477 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 IFI44LQ53G44 452 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 RIPPLY2Q5TAB7 128 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 HBMQ6B0K9 141 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 ATP6V1C2Q8NEY4 427 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 FNDC9Q8TBE3 224 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 STK35Q8TDR2 534 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 ADAMTS16Q8TE57 1224 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 ITLN2Q8WWU7 325 aaPredicted RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 GEMIN6Q8WXD5 167 aaKnown RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 ASB9Q96DX5 294 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 TRIB1Q96RU8 372 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 PTDSS2Q9BVG9 487 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 POLR2J2Q9GZM3 115 aaKnown RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 POLR2J3Q9H1A7 115 aaKnown RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 MUC13Q9H3R2 512 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 TMEM27Q9HBJ8 222 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 SERINC1Q9NRX5 453 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 MAN2C1Q9NTJ4 1040 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 STOML1Q9UBI4 398 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 Q9UFV3 132 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 RPS6KA6Q9UK32 745 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 ING1Q9UK53 422 aaPredicted RBP11.12□□□□□ -0.63
USP40-205ENST00000430158 TRAPPC4Q9Y296 219 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 HDGFL3Q9Y3E1 203 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 HCFC1P51610 2035 aa11.12□□□□□ -0.63
USP40-205ENST00000430158 TRAPPC13A5PLN9 417 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 LIPT2A6NK58 231 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 CPSF4LA6NMK7 179 aaKnown RBP11.11□□□□□ -0.63
USP40-205ENST00000430158 A8MVM7 634 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 ZNF814B7Z6K7 855 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 ZG16O60844 167 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 RCBTB2O95199 551 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 OR5F1O95221 314 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 PMS2P2O95744 297 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 PNMTP11086 282 aa11.11□□□□□ -0.63
USP40-205ENST00000430158 CXCR1P25024 350 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms