RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 OR4Q2P0C623 313 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 UQCRC2P22695 453 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 AHCYP23526 432 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 JAG1P78504 1218 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SERINC3Q13530 473 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CCINQ13939 588 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4A47Q6IF82 309 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR52N2Q8NGI0 321 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4A4PQ8NGN8 299 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 NANPQ8TBE9 248 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 GMLQ99445 158 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SUSD2Q9UGT4 822 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SBF1O95248 1867 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 HYAL2Q12891 473 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SLAMF1Q13291 335 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 GLB1L2Q8IW92 636 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 BAP18Q8IXM2 172 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 KRTCAP2Q8N6L1 136 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 BEND2Q8NDZ0 799 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR5AK2Q8NH90 309 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 FIBINQ8TAL6 211 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SFXN5Q8TD22 340 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 RERGQ96A58 199 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 TBL1XR1Q9BZK7 514 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CACNG4Q9UBN1 327 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 GIMAP2Q9UG22 337 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 TLX2O43763 284 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SYPP08247 313 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 NPY4RP50391 375 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 C9orf64Q5T6V5 341 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 LIPJQ5W064 366 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR52H1Q8NGJ2 320 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 C20orf27Q9GZN8 174 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 KCNG2Q9UJ96 466 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 DNAJC15Q9Y5T4 150 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 E5RGE8 158 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CNOT4O95628 575 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 NUDT14O95848 222 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 EPXP11678 715 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 ABCD3P28288 659 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC6A6P31641 620 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 GNALP38405 381 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 HNRNPKP61978 463 aaKnown RBP eCLIP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 RAB11AP62491 216 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SMAD3P84022 425 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 MPPE1Q53F39 396 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 NLRC3Q7RTR2 1065 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM26EQ8N5C1 309 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF738Q8NE65 137 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CCDC54Q8NEL0 328 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 UBTD2Q8WUN7 234 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR5AC2Q9NZP5 309 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SH2B3Q9UQQ2 575 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 BACE2Q9Y5Z0 518 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 GSTZ1O43708 216 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR10H2O60403 315 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 PEX10O60683 326 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SRPX2O60687 465 aaPredicted RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 PQBP1O60828 265 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SCGB1D1O95968 90 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 LPLP06858 475 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 FDXRP22570 491 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 TIGD5Q53EQ6 642 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 CLEC12AQ5QGZ9 265 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 PRPF38BQ5VTL8 546 aaKnown RBP7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 KIAA0319Q5VV43 1072 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 OR4F3Q6IEY1 312 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 DPPA3Q6W0C5 159 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 NFKBIDQ8NI38 313 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 DDOQ99489 341 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 SLC35B3Q9H1N7 401 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 BANF2Q9H503 90 aa7.05□□□□□ -1.28
SYNPO2-202ENST00000429713 LRP5LA4QPB2 252 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM72CH0Y354 149 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 M0R129 80 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SMPD1P17405 629 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SSR2P43308 183 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GABREP78334 506 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 GPR176Q14439 515 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 UNC50Q53HI1 259 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM72AQ5TYM5 149 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM72DQ6L9T8 149 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ARL9Q6T311 187 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 CEACAM20Q6UY09 585 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 FAM72BQ86X60 149 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 NPWQ8N729 165 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF709Q8N972 641 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR6N1Q8NGY5 312 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TRMT10AQ8TBZ6 339 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SCGB1C1Q8TD33 95 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TSEN15Q8WW01 171 aaKnown RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 OR5M11Q96RB7 305 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 UBL7Q96S82 380 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 TVP23BQ9NYZ1 205 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 LRFN1Q9P244 771 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 SRPK3Q9UPE1 567 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 VWA8A3KMH1 1905 aa7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 ZNF705GA8MUZ8 300 aaPredicted RBP7.04□□□□□ -1.28
SYNPO2-202ENST00000429713 RNASET2O00584 256 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms