RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TMEM245Q9H330 911 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 IKZF5Q9H5V7 419 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 SIAEQ9HAT2 523 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 TPT1P8Q9HAU6 139 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 RANGRFQ9HD47 186 aaPredicted RBP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 MYO10Q9HD67 2058 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 MARCH5Q9NX47 278 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 SPASTQ9UBP0 616 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 VPS29Q9UBQ0 182 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 STUB1Q9UNE7 303 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 DUSP12Q9UNI6 340 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 PPIEQ9UNP9 301 aaKnown RBP4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ABCG2Q9UNQ0 655 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 ERVK-11Q9UQG0 969 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 DLGAP4Q9Y2H0 992 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 KLK4Q9Y5K2 254 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 STON1Q9Y6Q2 735 aa4.59□□□□□ -1.67
LINC00458-202ENST00000427299 MUC22E2RYF6 1773 aaPredicted RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TRBC2A0A5B9 178 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 FAM172BPA6NC97 362 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 MGAT4DA6NG13 374 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TMEM202A6NGA9 273 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 SNTNA6NMZ2 147 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 IQCF5A8MTL0 148 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 H0YIV9 168 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 hCG_2039718K7EN88 272 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CCRL2O00421 344 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 GAPDHSO14556 408 aaPredicted RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 HAT1O14929 419 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 MYL12BO14950 172 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 PCDH7O60245 1069 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 KCNJ13O60928 360 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TRIM3O75382 744 aaPredicted RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 RFPL2O75678 378 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TPPPO94811 219 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CCNB2O95067 398 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 NKX2-2O95096 273 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ALPIP09923 528 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 PTAFRP25105 342 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 PTPN6P29350 595 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ALDH4A1P30038 563 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 GSSP48637 474 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 SLC11A1P49279 550 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 NUDT6P53370 316 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 PNLIPRP2P54317 469 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 UGT2B15P54855 530 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 MLLT10P55197 1068 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 SMIM11AP58511 58 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 BPIFB3P59826 476 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 POLR2LP62875 67 aaKnown RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 VLDLRP98155 873 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 BNC1Q01954 994 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 RIPPLY1Q0D2K3 151 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CHIT1Q13231 466 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 PPIGQ13427 754 aaKnown RBP eCLIP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 RBM39Q14498 530 aaKnown RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TMEM44Q2T9K0 475 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CDONQ4KMG0 1287 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CPTPQ5TA50 214 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TMEM236Q5W0B7 351 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 LRRC66Q68CR7 880 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 BRAT1Q6PJG6 821 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ANGPTL8Q6UXH0 198 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CFAP77Q6ZQR2 320 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TSPAN33Q86UF1 283 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 HAPLN4Q86UW8 402 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 SLC22A16Q86VW1 577 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ANKRD46Q86W74 232 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ENTHD1Q8IYW4 607 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 HS3ST5Q8IZT8 346 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 LINC00471Q8N535 108 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 OR4A15Q8NGL6 344 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CDC26Q8NHZ8 85 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 SPPL2AQ8TCT8 520 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ZNF675Q8TD23 568 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ELMO1Q92556 727 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 AP3S1Q92572 193 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 MRPS31Q92665 395 aaKnown RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 WBP2Q969T9 261 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 KIAA1143Q96AT1 154 aaPredicted RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TMEM159Q96B96 161 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 OTULINQ96BN8 352 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ECHDC3Q96DC8 303 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TPD52L3Q96J77 140 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 OR2A14Q96R47 310 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 GFM1Q96RP9 751 aaKnown RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 MCCC1Q96RQ3 725 aaPredicted RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CSF3RQ99062 836 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 RAD9AQ99638 391 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CTRCQ99895 268 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 CITED2Q99967 270 aaPredicted RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 NAA11Q9BSU3 229 aaPredicted RBP4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ZSCAN5AQ9BUG6 496 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 EFCAB11Q9BUY7 163 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 MND1Q9BWT6 205 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TM6SF2Q9BZW4 377 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 PLK3Q9H4B4 646 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 TMEM38AQ9H6F2 299 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 C3orf14Q9HBI5 128 aa4.58□□□□□ -1.68
LINC00458-202ENST00000427299 ZBTB20Q9HC78 741 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms