RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 PLK1P53350 603 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TIMM10P62072 90 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 CSTF1Q05048 431 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ELAVL3Q14576 367 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TAF7Q15545 349 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TPSAB1Q15661 275 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SYPL1Q16563 259 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 LRRC36Q1X8D7 754 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TIGITQ495A1 244 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 C10orf120Q5SQS8 335 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ATAD3BQ5T9A4 648 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TTC23Q5W5X9 447 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TPGS2Q68CL5 300 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PYHIN1Q6K0P9 492 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 CCDC137Q6PK04 289 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SYT10Q6XYQ8 523 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 MOB3BQ86TA1 216 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 LCA5Q86VQ0 697 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SLC38A6Q8IZM9 456 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 CEND1Q8N111 149 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 BBS1Q8NFJ9 593 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TRMT10AQ8TBZ6 339 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF564Q8TBZ8 553 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SETD7Q8WTS6 366 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 FAM122AQ96E09 287 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SH3YL1Q96HL8 342 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SENP8Q96LD8 212 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TSGA13Q96PP4 275 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 IL4I1Q96RQ9 567 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF184Q99676 751 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 OMDQ99983 421 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ERP44Q9BS26 406 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ANP32EQ9BTT0 268 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 RAB33BQ9H082 229 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 NAT10Q9H0A0 1025 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PDFQ9HBH1 243 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PLSCR3Q9NRY6 295 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 CD274Q9NZQ7 290 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 WRAP73Q9P2S5 460 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 WARS2Q9UGM6 360 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF221Q9UK13 617 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 RPH3ALQ9UNE2 315 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 CELA1Q9UNI1 258 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SCML2Q9UQR0 700 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 MRPS33Q9Y291 106 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 IFT52Q9Y366 437 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 KIF25-AS1Q9Y6Z4 181 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ADGRB2O60241 1585 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 DIP2BQ9P265 1576 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF646O15015 1829 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 MED14O60244 1454 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 AKAP12Q02952 1782 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 NPATQ14207 1427 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ATP10DQ9P241 1426 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 POLR3AO14802 1390 aaPredicted RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 DLG5Q8TDM6 1919 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TTC21BQ7Z4L5 1316 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CDC42BPGQ6DT37 1551 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 IGHV1OR15-1A0A075B7D0 117 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 IGHV2-70DA0A0C4DH43 119 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 MBLAC1A4D2B0 266 aaPredicted RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 NPIPA7E9PJI5 369 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 HIP1O00291 1037 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ABCD4O14678 606 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CPLX1O14810 134 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 MAGEB3O15480 346 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 RHOBTB1O94844 696 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 LALBAP00709 142 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 SEMG1P04279 462 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 H2BFMP0C1H6 154 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 DUX4L4P0CJ87 422 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 HSMCR30P0CW71 290 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 NPIPA8P0DM63 369 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF19P17023 458 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 NMT1P30419 496 aaKnown RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 HTR1FP30939 366 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CD80P33681 288 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 HSPA2P54652 639 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 RIPK4P57078 832 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CHRNB3Q05901 458 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CCDC173Q0VFZ6 552 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ORC2Q13416 577 aaPredicted RBP1.74□□□□□ -2.13
PTPRC-208ENST00000427110 MESDQ14696 234 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 GGTA1PQ4G0N0 100 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TP53I3Q53FA7 332 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CFAP157Q5JU67 520 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TMEM225Q6GV28 225 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 GALNT17Q6IS24 598 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 SCARA5Q6ZMJ2 495 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CCDC80Q76M96 950 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 PPP1R27Q86WC6 154 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 KRTAP11-1Q8IUC1 163 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TGIF2LYQ8IUE0 185 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CCDC50Q8IVM0 306 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CCDC65Q8IXS2 484 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 SLC35F2Q8IXU6 374 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 CLEC4FQ8N1N0 589 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 TMEM252Q8N6L7 170 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 KIR3DL3Q8N743 410 aa1.74□□□□□ -2.13
PTPRC-208ENST00000427110 ANKFN1Q8N957 763 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms