RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 FNDC9Q8TBE3 224 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 DNAJA3Q96EY1 480 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 CADM1Q9BY67 442 aaKnown RBP21.95■■□□□ 1.1
VEGFA-209ENST00000425836 AMBRA1Q9C0C7 1298 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 MUC13Q9H3R2 512 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 TIGARQ9NQ88 270 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 HDGFL3Q9Y3E1 203 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 ZNF175Q9Y473 711 aa21.95■■□□□ 1.1
VEGFA-209ENST00000425836 A8MVM7 634 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 LYPD3O95274 346 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 RNF224P0DH78 156 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 ATP6V1B2P21281 511 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 CEACAM8P31997 349 aaPredicted RBP21.94■■□□□ 1.1
VEGFA-209ENST00000425836 SWT1Q5T5J6 900 aaKnown RBP21.94■■□□□ 1.1
VEGFA-209ENST00000425836 RIPPLY2Q5TAB7 128 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 CYP2R1Q6VVX0 501 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 RNF217Q8TC41 542 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 CCDC124Q96CT7 223 aaKnown RBP21.94■■□□□ 1.1
VEGFA-209ENST00000425836 POTEKPQ9BYX7 375 aa21.94■■□□□ 1.1
VEGFA-209ENST00000425836 A0A087WUJ7 227 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 TRAPPC13A5PLN9 417 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 EBAG9O00559 213 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 NPIPB7O75200 414 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 IFNW1P05000 195 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 DIO1P49895 249 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 RAC3P60763 192 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 EGR4Q05215 589 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 DHFR2Q86XF0 187 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 ASB9Q96DX5 294 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 PYURFQ96I23 114 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 TM9SF2Q99805 663 aa21.93■■□□□ 1.1
VEGFA-209ENST00000425836 MCTS1Q9ULC4 181 aaKnown RBP21.93■■□□□ 1.1
VEGFA-209ENST00000425836 A0A0G2JNJ9 132 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 SULT2B1O00204 365 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 CHP2O43745 196 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 AQP8O94778 261 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 SYNGR4O95473 234 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 IL2RAP01589 272 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 IMPDH2P12268 514 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 PIN1Q13526 163 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-209ENST00000425836 LCN8Q6JVE9 175 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 CCDC121Q6ZUS5 278 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 P4HA3Q7Z4N8 544 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 NAXEQ8NCW5 288 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 STK35Q8TDR2 534 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 CPNE4Q96A23 557 aaPredicted RBP21.92■■□□□ 1.1
VEGFA-209ENST00000425836 SLC41A3Q96GZ6 507 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 POLR2J2Q9GZM3 115 aaKnown RBP21.92■■□□□ 1.1
VEGFA-209ENST00000425836 POLR2J3Q9H1A7 115 aaKnown RBP21.92■■□□□ 1.1
VEGFA-209ENST00000425836 Q9UFV3 132 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 SLC7A7Q9UM01 511 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 RNF6Q9Y252 685 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 V9GYQ6 96 aa21.92■■□□□ 1.1
VEGFA-209ENST00000425836 IGKV1D-42A0A075B6H8 117 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 ACOT8O14734 319 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 RCBTB2O95199 551 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 PMS2P2O95744 297 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 SMSP52788 366 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 TAS2R41P59536 307 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 CSNK2A1P68400 391 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-209ENST00000425836 ZNF239Q16600 458 aaKnown RBP21.91■■□□□ 1.1
VEGFA-209ENST00000425836 PPP4R4Q6NUP7 873 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 LINC00114Q6XXX2 140 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 GDF7Q7Z4P5 450 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 TSEN54Q7Z6J9 526 aaKnown RBP21.91■■□□□ 1.1
VEGFA-209ENST00000425836 CCDC71Q8IV32 467 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-209ENST00000425836 ROBO4Q8WZ75 1007 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 LRMDAQ9H2I8 198 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 RIMS3Q9UJD0 308 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 TRAPPC4Q9Y296 219 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 HIVEP3Q5T1R4 2406 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 OR5F1O95221 314 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 YAP1P46937 504 aaKnown RBP21.91■■□□□ 1.1
VEGFA-209ENST00000425836 TRAP1Q12931 704 aaKnown RBP21.91■■□□□ 1.1
VEGFA-209ENST00000425836 C1orf140Q5VVS0 124 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 WDR88Q6ZMY6 472 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 MRGPRGQ86SM5 289 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 SSC4DQ8WTU2 575 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 ITLN2Q8WWU7 325 aaPredicted RBP21.91■■□□□ 1.1
VEGFA-209ENST00000425836 PRRG4Q9BZD6 226 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 RNF122Q9H9V4 155 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 A4GNTQ9UNA3 340 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 MYO18BQ8IUG5 2567 aa21.91■■□□□ 1.1
VEGFA-209ENST00000425836 HSPB2A8KAH6 182 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 SEMG1P04279 462 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 KLK2P20151 261 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 ENPP1P22413 925 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 IDUAP35475 653 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 OR2B6P58173 313 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 HSPB2Q16082 182 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 P3H2Q8IVL5 708 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 MCUR1Q96AQ8 359 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 INTS12Q96CB8 462 aaKnown RBP21.9■■□□□ 1.1
VEGFA-209ENST00000425836 KTI12Q96EK9 354 aaPredicted RBP21.9■■□□□ 1.1
VEGFA-209ENST00000425836 C7orf34Q96L11 122 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 PRRC1Q96M27 445 aa21.9■■□□□ 1.1
VEGFA-209ENST00000425836 HELZ2Q9BYK8 2649 aaKnown RBP21.9■■□□□ 1.1
VEGFA-209ENST00000425836 TCRBV5S2A0A599 114 aa21.89■■□□□ 1.09
VEGFA-209ENST00000425836 J3KTA2 159 aa21.89■■□□□ 1.09
VEGFA-209ENST00000425836 FCGR2AP12318 317 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms