RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CLIC1O00299 241 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 SMAD9O15198 467 aaKnown RBP11.29□□□□□ -0.6
SGCE-203ENST00000425444 YES1P07947 543 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 RPS4Y1P22090 263 aaKnown RBP11.29□□□□□ -0.6
SGCE-203ENST00000425444 MRPL19P49406 292 aaKnown RBP11.29□□□□□ -0.6
SGCE-203ENST00000425444 MVDP53602 400 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 RASGEF1BQ0VAM2 473 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 CHRFAM7AQ494W8 412 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 RPS26P11Q5JNZ5 115 aaPredicted RBP11.29□□□□□ -0.6
SGCE-203ENST00000425444 AP1ARQ63HQ0 302 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 ALKBH2Q6NS38 261 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 STAC2Q6ZMT1 411 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 TMPPEQ6ZT21 453 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 VRK2Q86Y07 508 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 ZNF440Q8IYI8 595 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 OR52P1PQ8NH57 321 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 PMM1Q92871 262 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 SPDL1Q96EA4 605 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 MAGEB18Q96M61 343 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 PSD2Q9BQI7 771 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 OR11A1Q9GZK7 315 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 ACTR6Q9GZN1 396 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 PAIP1Q9H074 479 aaKnown RBP11.29□□□□□ -0.6
SGCE-203ENST00000425444 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 ZNF443Q9Y2A4 671 aaPredicted RBP11.29□□□□□ -0.6
SGCE-203ENST00000425444 HDGFL3Q9Y3E1 203 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 PCDHB14Q9Y5E9 798 aa11.29□□□□□ -0.6
SGCE-203ENST00000425444 A0A096LPI6 279 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 TMED7-TICAM2A0A0A6YYA0 188 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 DEFB108AA8MXU0 73 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 C5orf58C9J3I9 102 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 CYTIPO60759 359 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 ADAM11O75078 769 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 GKN3PP0CG01 181 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 PSMB1P20618 241 aaKnown RBP11.28□□□□□ -0.6
SGCE-203ENST00000425444 IL32P24001 234 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 FKBP2P26885 142 aaKnown RBP11.28□□□□□ -0.6
SGCE-203ENST00000425444 POLR2HP52434 150 aaKnown RBP11.28□□□□□ -0.6
SGCE-203ENST00000425444 NR1H2P55055 460 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 OR2B6P58173 313 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 COPZ1P61923 177 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 EPS8Q12929 822 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 FADDQ13158 208 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 TNK1Q13470 666 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 SQLEQ14534 574 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 LARS2Q15031 903 aaKnown RBP11.28□□□□□ -0.6
SGCE-203ENST00000425444 AGKQ53H12 422 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 BLOC1S3Q6QNY0 202 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 ZNF836Q6ZNA1 936 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 WFDC8Q8IUA0 241 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 SLC38A5Q8WUX1 472 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 CKAP2Q8WWK9 683 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 ZNF775Q96BV0 537 aaPredicted RBP11.28□□□□□ -0.6
SGCE-203ENST00000425444 DDIT4LQ96D03 193 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 THOC1Q96FV9 657 aaKnown RBP11.28□□□□□ -0.6
SGCE-203ENST00000425444 ZNF300Q96RE9 604 aaPredicted RBP11.28□□□□□ -0.6
SGCE-203ENST00000425444 C19orf24Q9BVV8 132 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 ARMC7Q9H6L4 198 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 BCO1Q9HAY6 547 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 RLIMQ9NVW2 624 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 EMC3Q9P0I2 261 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 GPR52Q9Y2T5 361 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 TMED7Q9Y3B3 224 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 DSPPQ9NZW4 1301 aa11.28□□□□□ -0.6
SGCE-203ENST00000425444 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 SIAH2O43255 324 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 TLX2O43763 284 aaPredicted RBP11.27□□□□□ -0.61
SGCE-203ENST00000425444 HNRNPCL1O60812 293 aaKnown RBP11.27□□□□□ -0.61
SGCE-203ENST00000425444 PMS2P2O95744 297 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 NUDT7P0C024 238 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 TFPTP0C1Z6 253 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 NCF2P19878 526 aaPredicted RBP11.27□□□□□ -0.61
SGCE-203ENST00000425444 PPIBP23284 216 aaKnown RBP11.27□□□□□ -0.61
SGCE-203ENST00000425444 TACR3P29371 465 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 SLC1A3P43003 542 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 ATP4BP51164 291 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 IRX1P78414 480 aaPredicted RBP11.27□□□□□ -0.61
SGCE-203ENST00000425444 RGNQ15493 299 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 MAPK11Q15759 364 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 BEX5Q5H9J7 111 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 RNF220Q5VTB9 566 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 ABLIM2Q6H8Q1 611 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 C20orf204Q6ZNR8 217 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.27□□□□□ -0.61
SGCE-203ENST00000425444 GALNT5Q7Z7M9 940 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 MTDHQ86UE4 582 aaKnown RBP11.27□□□□□ -0.61
SGCE-203ENST00000425444 ADGRG3Q86Y34 549 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 GABRG1Q8N1C3 465 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 CADM2Q8N3J6 435 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 BBS10Q8TAM1 723 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 S100PBPQ96BU1 408 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 ARL5BQ96KC2 179 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 OR10A4Q9H209 315 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 NPHS2Q9NP85 383 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 TMEM181Q9P2C4 612 aa11.27□□□□□ -0.61
SGCE-203ENST00000425444 OSGIN1Q9UJX0 560 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms