RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 TAPBPLQ9BX59 468 aa12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 POTEKPQ9BYX7 375 aa12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 KLHL4Q9C0H6 718 aa12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 NSRP1Q9H0G5 558 aaKnown RBP12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 OR10A4Q9H209 315 aa12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 KAT8Q9H7Z6 458 aaKnown RBP12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 GID8Q9NWU2 228 aa12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 TESQ9UGI8 421 aaKnown RBP12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 PCNX3Q9H6A9 2034 aa12.65□□□□□ -0.38
SLC13A3-205ENST00000417157 MRASO14807 208 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 CD1EP15812 388 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 AQP1P29972 269 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 OR2B6P58173 313 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 KRTAP10-9P60411 292 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 ADRM1Q16186 407 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 C5orf46Q6UWT4 87 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 TFAP2EQ6VUC0 442 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 NET1Q7Z628 596 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 PATL1Q86TB9 770 aaKnown RBP12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 RANBP3LQ86VV4 465 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 C10orf111Q8N326 155 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 C10orf82Q8WW14 230 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 RASSF5Q8WWW0 418 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 USB1Q9BQ65 265 aaKnown RBP12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 HDHD5Q9BXW7 423 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 TRIM2Q9C040 744 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 C12orf10Q9HB07 376 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 SELENONQ9NZV5 590 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 GPR52Q9Y2T5 361 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 CHST2Q9Y4C5 530 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 CENPEQ02224 2701 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 MED12LQ86YW9 2145 aa12.64□□□□□ -0.39
SLC13A3-205ENST00000417157 ANKHD1Q8IWZ3 2542 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 CACNA1DQ01668 2161 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 IGKV3D-15A0A087WSY6 115 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 ELOA3DA6NLF2 546 aaPredicted RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 FBP2O00757 339 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 CNOT4O95628 575 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 PRG2P13727 222 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 PSMB1P20618 241 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 CCKARP32238 428 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 PCGF2P35227 344 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 RGS8P57771 180 aaPredicted RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 SF3A3Q12874 501 aaKnown RBP eCLIP12.63□□□□□ -0.392e-10■□□□□ 8.2
SLC13A3-205ENST00000417157 CAPRIN1Q14444 709 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 P2RY6Q15077 328 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 ELOA3BQ3SY89 546 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 NANOGP8Q6NSW7 305 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 PAQR6Q6TCH4 344 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 SNX32Q86XE0 403 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 PTOV1Q86YD1 416 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 ZNF100Q8IYN0 542 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 LSMEM1Q8N8F7 131 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 STEAP2Q8NFT2 490 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 ELOA3Q8NG57 546 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 RP9Q8TA86 221 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 SLC26A7Q8TE54 656 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 DNAJA4Q8WW22 397 aaPredicted RBP12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 C3orf49Q96BT1 292 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 LRRC58Q96CX6 371 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 ECSITQ9BQ95 431 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 NANOGQ9H9S0 305 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 ADGRG4Q8IZF6 3080 aa12.63□□□□□ -0.39
SLC13A3-205ENST00000417157 CRYBG3Q68DQ2 2970 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 AHSA1O95433 338 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 C8BP07358 591 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 PNMTP11086 282 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 GTF2E2P29084 291 aaKnown RBP12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 OR3A2P47893 321 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 SLC16A1P53985 500 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 PCBP3P57721 371 aaKnown RBP12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 SELPLGQ14242 412 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 FAM91A1Q658Y4 838 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 ERICH5Q6P6B1 374 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 C6orf89Q6UWU4 347 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 STAC2Q6ZMT1 411 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 SSX8Q7RTT4 187 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 NUFIP2Q7Z417 695 aaKnown RBP12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 SPATA21Q7Z572 469 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 ARPINQ7Z6K5 226 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 ATG4DQ86TL0 474 aaPredicted RBP12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 OR52E4Q8NGH9 312 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 STK35Q8TDR2 534 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 NINJ1Q92982 152 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 WFIKKN1Q96NZ8 548 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 TMEM27Q9HBJ8 222 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 ING1Q9UK53 422 aaPredicted RBP12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 SLC9A8Q9Y2E8 581 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 AP3M1Q9Y2T2 418 aa12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 NOSIPQ9Y314 301 aaKnown RBP12.62□□□□□ -0.39
SLC13A3-205ENST00000417157 HEATR5AQ86XA9 2040 aa12.61□□□□□ -0.39
SLC13A3-205ENST00000417157 LOC100653049A0A140TA62 436 aa12.61□□□□□ -0.39
SLC13A3-205ENST00000417157 LIPT2A6NK58 231 aa12.61□□□□□ -0.39
SLC13A3-205ENST00000417157 ZNF716A6NP11 495 aa12.61□□□□□ -0.39
SLC13A3-205ENST00000417157 TMEM229AB2RXF0 380 aa12.61□□□□□ -0.39
SLC13A3-205ENST00000417157 FRS3O43559 492 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms