RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SLC25A3Q00325 362 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 OR4F3Q6IEY1 312 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZCCHC23Q6ZST2 131 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 GRINAQ7Z429 371 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FAM71CQ8NEG0 241 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 XAGE5Q8WWM1 108 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 RAB8BQ92930 207 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MSI2Q96DH6 328 aaKnown RBP12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PIMREGQ9BSJ6 248 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MECRQ9BV79 373 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PPCSQ9HAB8 311 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PARPBPQ9NWS1 579 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TMEM181Q9P2C4 612 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 DCTN4Q9UJW0 460 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MOKQ9UQ07 419 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TRAPPC4Q9Y296 219 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC35A3Q9Y2D2 325 aa12.47□□□□□ -0.41
HLA-DQB2-229ENST00000411527 RNF103-CHMP3A0A140T963 221 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 KIAA0513O60268 411 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SKAP2O75563 359 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 G6PDP11413 515 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 APEHP13798 732 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 NR4A2P43354 598 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PRPS1P60891 318 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 H3F3AP84243 136 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TGFBR3Q03167 851 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 CARTPTQ16568 116 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SWI5Q1ZZU3 235 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 MST1LQ2TV78 715 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ATAD3BQ5T9A4 648 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TSPO2Q5TGU0 170 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TYW3Q6IPR3 259 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 HMGN2P46Q86SG4 172 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 C1orf162Q8NEQ5 155 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TUBGCP3Q96CW5 907 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZG16BQ96DA0 208 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SORCS2Q96PQ0 1159 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 NAA11Q9BSU3 229 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PRR14Q9BWN1 585 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 ZDHHC2Q9UIJ5 367 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 PCDHGB4Q9UN71 923 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 SLC9A8Q9Y2E8 581 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 WDR45Q9Y484 360 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FLVCR1Q9Y5Y0 555 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 FKBP7Q9Y680 259 aa12.46□□□□□ -0.41
HLA-DQB2-229ENST00000411527 TMED7-TICAM2A0A0A6YYA0 188 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 NDUFS8O00217 210 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 EIF1BO60739 113 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 AGR2O95994 175 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 WNT11O96014 354 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CDH2P19022 906 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 HNF1AP20823 631 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 IDH2P48735 452 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CLDN8P56748 225 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SLC35A1P78382 337 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 KCNJ10P78508 379 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 EMBQ6PCB8 327 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 LSRQ86X29 649 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ARFGAP2Q8N6H7 521 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OR4A15Q8NGL6 344 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 MIPOL1Q8TD10 442 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 OIT3Q8WWZ8 545 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ROPN1LQ96C74 230 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 APOPT1Q96IL0 206 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 FOXN4Q96NZ1 517 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 VRK1Q99986 396 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SAP130Q9H0E3 1048 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 POLE3Q9NRF9 147 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 SLC17A7Q9P2U7 560 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TMED7Q9Y3B3 224 aa12.45□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TLDC2A0PJX2 215 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CLDN24A6NM45 220 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 RNASET2O00584 256 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 KLF11O14901 512 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CPSF4O95639 269 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TGFAP01135 160 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 GUSBP08236 651 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 IMPDH2P12268 514 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 MPGP29372 298 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ARRB2P32121 409 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 HTR3AP46098 478 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 EMX2Q04743 252 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 MAD2L1Q13257 205 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 IQCCQ4KMZ1 466 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 C1QTNF12Q5T7M4 302 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 LIPNQ5VXI9 398 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 AP1ARQ63HQ0 302 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 TNFAIP8L2Q6P589 184 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 KLHL24Q6TFL4 600 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 FRRS1Q6ZNA5 592 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 ANKS4BQ8N8V4 417 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 CNOT9Q92600 299 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 PMM1Q92871 262 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 DDIT4LQ96D03 193 aa12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 EXOSC3Q9NQT5 275 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB2-229ENST00000411527 IGHV4-61A0A0C4DH41 118 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms