RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 GSPT2Q8IYD1 628 aaKnown RBP14.64□□□□□ -0.07
MRPL55-220ENST00000411464 CLEC4FQ8N1N0 589 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 KIF18AQ8NI77 898 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 EPS8L3Q8TE67 593 aaKnown RBP14.64□□□□□ -0.07
MRPL55-220ENST00000411464 XAGE5Q8WWM1 108 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 TUBGCP3Q96CW5 907 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 FBXO17Q96EF6 278 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 OR51I1Q9H343 314 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 SLC17A5Q9NRA2 495 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 TMEM181Q9P2C4 612 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 SLC9A8Q9Y2E8 581 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 PDLIM1O00151 329 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 NDUFS8O00217 210 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 SKAP2O75563 359 aaPredicted RBP14.63□□□□□ -0.07
MRPL55-220ENST00000411464 WNT11O96014 354 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 G6PDP11413 515 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 IGFBP5P24593 272 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 HTR3AP46098 478 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 CLDN8P56748 225 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 SLC35A1P78382 337 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 MAD2L1Q13257 205 aaPredicted RBP14.63□□□□□ -0.07
MRPL55-220ENST00000411464 FAM120AOSQ5T036 256 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 IL17RELQ6ZVW7 336 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 CLECL1Q8IZS7 167 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 ARFGAP2Q8N6H7 521 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 FAM71CQ8NEG0 241 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 OR4A15Q8NGL6 344 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 PMM1Q92871 262 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 APOPT1Q96IL0 206 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 PIMREGQ9BSJ6 248 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 NAA11Q9BSU3 229 aaPredicted RBP14.63□□□□□ -0.07
MRPL55-220ENST00000411464 MECRQ9BV79 373 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 POLE3Q9NRF9 147 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 SLC7A10Q9NS82 523 aa14.63□□□□□ -0.07
MRPL55-220ENST00000411464 ATP6V1G2-DDX39BF2Z307 99 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 KIAA0513O60268 411 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 GUSBP08236 651 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 OR12D1P0DN82 309 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 APEHP13798 732 aaKnown RBP14.62□□□□□ -0.07
MRPL55-220ENST00000411464 NR4A2P43354 598 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 IDH2P48735 452 aaKnown RBP14.62□□□□□ -0.07
MRPL55-220ENST00000411464 KCNJ10P78508 379 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 H3F3AP84243 136 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 SRSF2Q01130 221 aaKnown RBP14.62□□□□□ -0.07
MRPL55-220ENST00000411464 CARTPTQ16568 116 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 OR4F3Q6IEY1 312 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 TYW3Q6IPR3 259 aaKnown RBP14.62□□□□□ -0.07
MRPL55-220ENST00000411464 EMBQ6PCB8 327 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 ZCCHC23Q6ZST2 131 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 MIPOL1Q8TD10 442 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 C3orf49Q96BT1 292 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 ROPN1LQ96C74 230 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 DDIT4LQ96D03 193 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 EXOSC3Q9NQT5 275 aaKnown RBP14.62□□□□□ -0.07
MRPL55-220ENST00000411464 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.62□□□□□ -0.07
MRPL55-220ENST00000411464 NOP53Q9NZM5 478 aaKnown RBP14.62□□□□□ -0.07
MRPL55-220ENST00000411464 ZDHHC2Q9UIJ5 367 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 MOKQ9UQ07 419 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 FLVCR1Q9Y5Y0 555 aa14.62□□□□□ -0.07
MRPL55-220ENST00000411464 TMED7-TICAM2A0A0A6YYA0 188 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 TLDC2A0PJX2 215 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 SLC35F4A4IF30 521 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 VWC2LB2RUY7 222 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 RNASET2O00584 256 aaKnown RBP14.61□□□□□ -0.07
MRPL55-220ENST00000411464 BCAS1O75363 584 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-220ENST00000411464 CDH2P19022 906 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-220ENST00000411464 MPGP29372 298 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 SERPINB5P36952 375 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 SNRPD2P62316 118 aaKnown RBP14.61□□□□□ -0.07
MRPL55-220ENST00000411464 SLC25A3Q00325 362 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 EMX2Q04743 252 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 SWI5Q1ZZU3 235 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 MST1LQ2TV78 715 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 IQCCQ4KMZ1 466 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 TSPO2Q5TGU0 170 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 LIPNQ5VXI9 398 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 TNFAIP8L2Q6P589 184 aaPredicted RBP14.61□□□□□ -0.07
MRPL55-220ENST00000411464 VPS37AQ8NEZ2 397 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 RAB8BQ92930 207 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 ZG16BQ96DA0 208 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 MSI2Q96DH6 328 aaKnown RBP14.61□□□□□ -0.07
MRPL55-220ENST00000411464 FOXN4Q96NZ1 517 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 KCNS3Q9BQ31 491 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 PRR14Q9BWN1 585 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 SAP130Q9H0E3 1048 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 MKS1Q9NXB0 559 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 TMED7Q9Y3B3 224 aa14.61□□□□□ -0.07
MRPL55-220ENST00000411464 LOC390937A0A1W2PQ73 354 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 ZNF208O43345 1280 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 TGFAP01135 160 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 UQCRC2P22695 453 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 SERPINF1P36955 418 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 POLR2HP52434 150 aaKnown RBP14.6□□□□□ -0.07
MRPL55-220ENST00000411464 HPCAP84074 193 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 SQLEQ14534 574 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 SLC17A1Q14916 467 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 GPAT3Q53EU6 434 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 AP1ARQ63HQ0 302 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 FRRS1Q6ZNA5 592 aa14.6□□□□□ -0.07
MRPL55-220ENST00000411464 HMGN2P46Q86SG4 172 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms