RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 FAM171A2A8MVW0 826 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 HMGB1P1B2RPK0 211 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 DSTNP60981 165 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 EPS8Q12929 822 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 FOXD4Q12950 439 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 COX20Q5RI15 118 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 TIMM23BQ5SRD1 257 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 C6orf10Q5SRN2 563 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 RNF220Q5VTB9 566 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 FBXW9Q5XUX1 488 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 DNAJC14Q6Y2X3 702 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 OLIG3Q7RTU3 272 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 HDXQ7Z353 690 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 MAVSQ7Z434 540 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF611Q8N823 705 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 GTF2H4Q92759 462 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 S100PBPQ96BU1 408 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 PLPPR2Q96GM1 343 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 CCL19Q99731 98 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 RABEP2Q9H5N1 569 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 UBTD1Q9HAC8 227 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 ARGLU1Q9NWB6 273 aaPredicted RBP12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 OSGIN1Q9UJX0 560 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 TMED7Q9Y3B3 224 aa12.89□□□□□ -0.35
NIF3L1-205ENST00000409588 IGHV3-15A0A0B4J1V0 119 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 C9JVG2 144 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 CLIC1O00299 241 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 PGM3O95394 542 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 BMP2P12643 396 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 CXCR1P25024 350 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 TACR3P29371 465 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 RGNQ15493 299 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 MRPL2Q5T653 305 aaKnown RBP12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 ABLIM2Q6H8Q1 611 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 OR7E24Q6IFN5 339 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 BHLHA15Q7RTS1 189 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 BIVMQ86UB2 503 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 PNPT1Q8TCS8 783 aaKnown RBP12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 DYDC1Q8WWB3 177 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 RADILQ96JH8 1075 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 SF3B5Q9BWJ5 86 aaKnown RBP12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 CXorf56Q9H5V9 222 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 DLL4Q9NR61 685 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 CORO2BQ9UQ03 480 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 NOSIPQ9Y314 301 aaKnown RBP12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 PCDHB14Q9Y5E9 798 aa12.88□□□□□ -0.35
NIF3L1-205ENST00000409588 SETD2Q9BYW2 2564 aaPredicted RBP12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 CLDN24A6NM45 220 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF716A6NP11 495 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 HS3ST1O14792 307 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 MRPL33O75394 65 aaKnown RBP12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 VAMP5O95183 116 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 GPIP06744 558 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 CD3EP07766 207 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 ETFAP13804 333 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 ETS2P15036 469 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 GGT1P19440 569 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 PAX7P23759 505 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 IDH3AP50213 366 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 ATP4BP51164 291 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 OR2B6P58173 313 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 TAB1Q15750 504 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 MAPK11Q15759 364 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 NCMAPQ5T1S8 102 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 PAQR6Q6TCH4 344 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 WFDC8Q8IUA0 241 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 TMEM171Q8WVE6 324 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 VPS33AQ96AX1 596 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 APH1AQ96BI3 265 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 ARL5BQ96KC2 179 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 BDH2Q9BUT1 245 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 SPATA9Q9BWV2 254 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 EVA1AQ9H8M9 152 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 A4GALTQ9NPC4 353 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 SLC6A13Q9NSD5 602 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 MTORP42345 2549 aa12.87□□□□□ -0.35
NIF3L1-205ENST00000409588 A8MVM7 634 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 ADAM11O75078 769 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 BCAS1O75363 584 aaPredicted RBP12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 BCHEP06276 602 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 COX5AP20674 150 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 ACAA2P42765 397 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 PLAURQ03405 335 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 LRIF1Q5T3J3 769 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 WFDC11Q8NEX6 87 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 BHLHE22Q8NFJ8 381 aaPredicted RBP12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 BBS10Q8TAM1 723 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 ZNF300Q96RE9 604 aaPredicted RBP12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 SIKE1Q9BRV8 207 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 SPATA5L1Q9BVQ7 753 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 PAIP1Q9H074 479 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 MRGBPQ9NV56 204 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 INTS9Q9NV88 658 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 ASB6Q9NWX5 421 aa12.86□□□□□ -0.35
NIF3L1-205ENST00000409588 SLC9A8Q9Y2E8 581 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms