RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 LIPEQ05469 1076 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 BST2Q10589 180 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 CUL1Q13616 776 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 LRRC66Q68CR7 880 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 ZNF772Q68DY9 489 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 LEMD1Q68G75 181 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 FAAP20Q6NZ36 180 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 NCCRP1Q6ZVX7 275 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC47A2Q86VL8 602 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 C9orf40Q8IXQ3 194 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC22A18ASQ8N1D0 253 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 RNF10Q8N5U6 811 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 OR2L3Q8NG85 312 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 OR6T1Q8NGN1 323 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC22A8Q8TCC7 542 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 TFB1MQ8WVM0 346 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 ITLN1Q8WWA0 313 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 UBE2E3Q969T4 207 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 C12orf42Q96LP6 360 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 NAT10Q9H0A0 1025 aaKnown RBP3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 ADNPQ9H2P0 1102 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 SMYD3Q9H7B4 428 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 HEXA-AS1Q9H8Q6 139 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 POPDC2Q9HBU9 364 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 TIGARQ9NQ88 270 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 SLC2A8Q9NY64 477 aa3.84□□□□□ -1.79
HMGB1P13-201ENST00000406019 A0A075B6Q4 140 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 SERTM2A0A1B0GWG4 89 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 A0A1W2PPV9 198 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 NCF1BA6NI72 391 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 NCF1CA8MVU1 366 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 B4DXG7 233 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 H0YIV9 168 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 L7N2F9 121 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 PRKYO43930 277 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 WBP4O75554 376 aaKnown RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 FLOT1O75955 427 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR5F1O95221 314 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 LYPD3O95274 346 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 GJB5O95377 273 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 CST1P01037 141 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 LAMP1P11279 417 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 POLR2EP19388 210 aaKnown RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 NMT1P30419 496 aaKnown RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 CRYBB2P43320 205 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 TUFMP49411 452 aaKnown RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 STARP49675 285 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 PRKXP51817 358 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 EFNA3P52797 238 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 CARD18P57730 90 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 DSTNP60981 165 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 ENPEPQ07075 957 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 FCHO2Q0JRZ9 810 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 HADHQ16836 314 aaKnown RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 FBXO48Q5FWF7 155 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 CARD17Q5XLA6 110 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 UFSP1Q6NVU6 142 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 TIPARPQ7Z3E1 657 aaKnown RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 GPR137CQ8N3F9 429 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF321PQ8N8H1 164 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 SPATA4Q8NEY3 305 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 MAIP1Q8WWC4 291 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 TOMM40LQ969M1 308 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 PPP1R14BQ96C90 147 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 ZNF689Q96CS4 500 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 TIMD4Q96H15 378 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 PPP1R16AQ96I34 528 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 ARL5BQ96KC2 179 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 C18orf12Q96KH6 178 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 ATP6V1G3Q96LB4 118 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 ATOH8Q96SQ7 321 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 CYP2S1Q96SQ9 504 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 MCHR1Q99705 422 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 GAL3ST1Q99999 423 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 FAM192AQ9GZU8 254 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 ANKRD19PQ9H560 264 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 EXO5Q9H790 373 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 CAB39LQ9H9S4 337 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 GNB4Q9HAV0 340 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 FKBP14Q9NWM8 211 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 PAK1IP1Q9NWT1 392 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 SPRR3Q9UBC9 169 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 PRSS21Q9Y6M0 314 aa3.83□□□□□ -1.8
HMGB1P13-201ENST00000406019 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 OR6C74A6NCV1 312 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 TCP11X1B4DZS4 312 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 E9PLD3 99 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 H7C423 109 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 SAP18O00422 153 aaKnown RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 NDUFAB1O14561 156 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 LSM1O15116 133 aaKnown RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 YKT6O15498 198 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 KRT14P02533 472 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 GAPDHP04406 335 aaKnown RBP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 CCDC130P13994 396 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 DPEP1P16444 411 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 BCL3P20749 454 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 IGHV1-2P23083 117 aa3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 PTBP1P26599 531 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P13-201ENST00000406019 GNA11P29992 359 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms