RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SIGLEC6O43699 453 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 IGLV3-27P01718 113 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 CHRM4P08173 479 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ELAVL4P26378 380 aaKnown RBP16.91■□□□□ 0.3
COL18A1-204ENST00000400337 AQP2P41181 271 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TRAPPC6BQ86SZ2 158 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 OR1E3Q8WZA6 343 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TAS2R16Q9NYV7 291 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ARHGAP33O14559 1287 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 DNAJB6O75190 326 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 NCR1O76036 304 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 OR8G3PP0DMU2 310 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SLC5A2P31639 672 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 PRAMEF20Q5VT98 475 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 GARNL3Q5VVW2 1013 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 MED25Q71SY5 747 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 OR6T1Q8NGN1 323 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ABHD5Q8WTS1 349 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TM9SF4Q92544 642 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 NIPSNAP1Q9BPW8 284 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ULBP2Q9BZM5 246 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 AKAIN1P0CW23 69 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 RAC2P15153 192 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ACPPP15309 386 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 TUBG1P23258 451 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 FGFBP1Q14512 234 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SHHQ15465 462 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SLC7A13Q8TCU3 470 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 LINC01599Q8WXQ3 324 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 MYEOVQ96EZ4 313 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 HRASLS5Q96KN8 279 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ZNF285Q96NJ3 590 aa16.91■□□□□ 0.3
COL18A1-204ENST00000400337 SIDT1Q9NXL6 827 aaKnown RBP16.91■□□□□ 0.3
COL18A1-204ENST00000400337 ARPC5O15511 151 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 HCRTR1O43613 425 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 GABRR1P24046 479 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 RIPPLY1Q0D2K3 151 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ADIPOR2Q86V24 386 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ELP4Q96EB1 424 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 PRR14Q9BWN1 585 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ENKD1Q9H0I2 346 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 PSORS1C1Q9UIG5 152 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 TMX2-CTNND1H3BSU7 103 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 PTHP01270 115 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ILKQ13418 452 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 PDZD9Q8IXQ8 264 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 SLC16A11Q8NCK7 471 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 BRIX1Q8TDN6 353 aaKnown RBP16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ZNF775Q96BV0 537 aaPredicted RBP16.9■□□□□ 0.3
COL18A1-204ENST00000400337 NELFAQ9H3P2 528 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 RGCCQ9H4X1 137 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM38AQ9H6F2 299 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 MED17Q9NVC6 651 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 LOC102723532A0A0G2JNH3 316 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 METTL15A6NJ78 407 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 SLC35E2P0CK97 266 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 MRPS10P82664 201 aaKnown RBP16.9■□□□□ 0.3
COL18A1-204ENST00000400337 RPL22L1Q6P5R6 122 aaKnown RBP16.9■□□□□ 0.3
COL18A1-204ENST00000400337 TMEM255BQ8WV15 326 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 AMBRA1Q9C0C7 1298 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 OLAHQ9NV23 265 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 PPT2Q9UMR5 302 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 LRP5O75197 1615 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 A0A1B0GV50 99 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 A0A1B0GWA3 101 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 SLC1A3P43003 542 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ADPRHP54922 357 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ADARB1P78563 741 aaKnown RBP16.9■□□□□ 0.3
COL18A1-204ENST00000400337 DCDP81605 110 aaKnown RBP16.9■□□□□ 0.3
COL18A1-204ENST00000400337 FAM198BQ6UWH4 519 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ENTHD1Q8IYW4 607 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 EDAQ92838 391 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 ITPKCQ96DU7 683 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 NDUFAF4Q9P032 175 aa16.9■□□□□ 0.3
COL18A1-204ENST00000400337 H0Y8X5 98 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 PAHP00439 452 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 CDK2P24941 298 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 SLC35D2Q76EJ3 337 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 TECPR1Q7Z6L1 1165 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 SLC2A12Q8TD20 617 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 LCORQ96JN0 433 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ZNF582Q96NG8 517 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ZDHHC5Q9C0B5 715 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 KIR3DX1Q9H7L2 352 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ZNF281Q9Y2X9 895 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 TMEM72A0PK05 275 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 PRKAR1BP31321 381 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 MFSD12Q6NUT3 480 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 LRRC28Q86X40 367 aaPredicted RBP16.89■□□□□ 0.29
COL18A1-204ENST00000400337 MAFIPQ8WZ33 124 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 DBHP09172 617 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 MAOAP21397 527 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 CCDC71LQ8N9Z2 235 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ASB17Q8WXJ9 295 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ASIC5Q9NY37 505 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 PRELID1Q9Y255 219 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 TTLL8A6PVC2 850 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 ANKRD30BLA7E2S9 258 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 UTS2O95399 124 aa16.89■□□□□ 0.29
COL18A1-204ENST00000400337 MT-ND4P03905 459 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms