RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 LGALS3BPQ08380 585 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TPBGQ13641 420 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 NFATC4Q14934 902 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM196Q5HYL7 178 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MRM1Q6IN84 353 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ULK3Q6PHR2 472 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 LYPD4Q6UWN0 246 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ATCAYQ86WG3 371 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SHISA5Q8N114 240 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 CA13Q8N1Q1 262 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PHOSPHO1Q8TCT1 267 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ZCCHC14Q8WYQ9 949 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RBM18Q96H35 190 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ELF4Q99607 663 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TMEM74BQ9NUR3 256 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF224Q9NZL3 707 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 A0A1B0GWA3 101 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SLC22A31A6NKX4 558 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 OR2B3O76000 313 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 EML2O95834 649 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PLGP00747 810 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 EN2P19622 333 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RFX2P48378 723 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RAB4BP61018 213 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF770Q6IQ21 691 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF425Q6IV72 752 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 CDRT4Q8N9R6 151 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 C1orf216Q8TAB5 229 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 DIO2Q92813 273 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 NKD1Q969G9 470 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SDHCQ99643 169 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 KATNB1Q9BVA0 655 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 Q9N2J8 555 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 CLDND1Q9NY35 253 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 CBLCQ9ULV8 474 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 CHST2Q9Y4C5 530 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 DOPEY2Q9Y3R5 2298 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 C19orf67A6NJJ6 358 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 KDM4EB2RXH2 506 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RBMXL2O75526 392 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PNPP00491 289 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RPS2P15880 293 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 IGFBP4P22692 258 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PTGS2P35354 604 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MTNR1BP49286 362 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 HTRA4P83105 476 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SLC25A35Q3KQZ1 300 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 BCL2L15Q5TBC7 163 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RTL4Q6ZR62 310 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RASGRP3Q8IV61 690 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 DGAT2Q96PD7 388 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TEAD3Q99594 435 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TEX101Q9BY14 249 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 HIPK2Q9H2X6 1198 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 UBQLN3Q9H347 655 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 FAM25EA8MYX2 175 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SYT5O00445 386 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PDCD5O14737 125 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RECKO95980 971 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 H2AFB2P0C5Z0 115 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ARR3P36575 388 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PSMA6P60900 246 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TFF2Q03403 129 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MRPL2Q5T653 305 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 NIPAL3Q6P499 406 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 VN1R4Q7Z5H5 301 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 OR13H1Q8NG92 308 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SUN5Q8TC36 379 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 THEM6Q8WUY1 208 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 THAP4Q8WY91 577 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MRPL48Q96GC5 212 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SLC6A18Q96N87 628 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ARHGAP9Q9BRR9 750 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 FOLH1BQ9HBA9 442 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MAN2C1Q9NTJ4 1040 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 CXorf51AA0A1B0GTR3 108 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TRDV1A0A1B0GX56 115 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ANKRD61A6NGH8 418 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 CENPBD1B2RD01 187 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PLA2G10O15496 165 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 DOK2O60496 412 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ARL6IP5O75915 188 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SCGNO76038 276 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 TPPPO94811 219 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SERPINA3P01011 423 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SYPP08247 313 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 MAGEB1P43366 347 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 C9orf50Q5SZB4 431 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF620Q6ZNG0 422 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SFTPA2Q8IWL1 248 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SNAPC3Q92966 411 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ST6GAL2Q96JF0 529 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ZNF285Q96NJ3 590 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 FUZQ9BT04 418 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 LIN7BQ9HAP6 207 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 FARSAQ9Y285 508 aaKnown RBP4.57□□□□□ -1.68
SMAD4-202ENST00000398417 PIKFYVEQ9Y2I7 2098 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 ARRDC5A6NEK1 342 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 SLC9B1P1A6NJY1 282 aa4.57□□□□□ -1.68
SMAD4-202ENST00000398417 RNF212BA8MTL3 300 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms